Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 Gm45328-201ENSMUST00000210942 917 ntBASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sf3a1Q8K4Z5 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sf3a1Q8K4Z5 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sf3a1Q8K4Z5 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sf3a1Q8K4Z5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.02■□□□□ 0.8
Sf3a1Q8K4Z5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sf3a1Q8K4Z5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sf3a1Q8K4Z5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sf3a1Q8K4Z5 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.02■□□□□ 0.8
Sf3a1Q8K4Z5 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sf3a1Q8K4Z5 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sf3a1Q8K4Z5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sf3a1Q8K4Z5 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Sf3a1Q8K4Z5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sf3a1Q8K4Z5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sf3a1Q8K4Z5 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sf3a1Q8K4Z5 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sf3a1Q8K4Z5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Sf3a1Q8K4Z5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sf3a1Q8K4Z5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sf3a1Q8K4Z5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sf3a1Q8K4Z5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sf3a1Q8K4Z5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.01■□□□□ 0.79
Sf3a1Q8K4Z5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Sf3a1Q8K4Z5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sf3a1Q8K4Z5 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sf3a1Q8K4Z5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sf3a1Q8K4Z5 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sf3a1Q8K4Z5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sf3a1Q8K4Z5 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.01■□□□□ 0.79
Sf3a1Q8K4Z5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sf3a1Q8K4Z5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sf3a1Q8K4Z5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sf3a1Q8K4Z5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Sf3a1Q8K4Z5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sf3a1Q8K4Z5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sf3a1Q8K4Z5 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sf3a1Q8K4Z5 Gm26596-201ENSMUST00000180464 2655 ntBASIC20■□□□□ 0.79
Sf3a1Q8K4Z5 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sf3a1Q8K4Z5 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sf3a1Q8K4Z5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Sf3a1Q8K4Z5 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Sf3a1Q8K4Z5 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Sf3a1Q8K4Z5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sf3a1Q8K4Z5 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sf3a1Q8K4Z5 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sf3a1Q8K4Z5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Sf3a1Q8K4Z5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Sf3a1Q8K4Z5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sf3a1Q8K4Z5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sf3a1Q8K4Z5 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sf3a1Q8K4Z5 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sf3a1Q8K4Z5 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sf3a1Q8K4Z5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sf3a1Q8K4Z5 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sf3a1Q8K4Z5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sf3a1Q8K4Z5 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Sf3a1Q8K4Z5 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sf3a1Q8K4Z5 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Sf3a1Q8K4Z5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Sf3a1Q8K4Z5 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Gm27704-201ENSMUST00000185094 107 ntBASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sf3a1Q8K4Z5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms