Protein–RNA interactions for Protein: Q8K2Z4

Ncapd2, Condensin complex subunit 1, mousemouse

Predictions only

Length 1,392 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ncapd2Q8K2Z4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ncapd2Q8K2Z4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ncapd2Q8K2Z4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
Ncapd2Q8K2Z4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 AC159106.1-201ENSMUST00000224421 690 ntBASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
Ncapd2Q8K2Z4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ncapd2Q8K2Z4 Gm11764-201ENSMUST00000120221 623 ntBASIC21.5■■□□□ 1.03
Ncapd2Q8K2Z4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ncapd2Q8K2Z4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC21.5■■□□□ 1.03
Ncapd2Q8K2Z4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC21.5■■□□□ 1.03
Ncapd2Q8K2Z4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ncapd2Q8K2Z4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ncapd2Q8K2Z4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ncapd2Q8K2Z4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ncapd2Q8K2Z4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ncapd2Q8K2Z4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC21.5■■□□□ 1.03
Ncapd2Q8K2Z4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC21.49■■□□□ 1.03
Ncapd2Q8K2Z4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC21.49■■□□□ 1.03
Ncapd2Q8K2Z4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ncapd2Q8K2Z4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC21.49■■□□□ 1.03
Ncapd2Q8K2Z4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ncapd2Q8K2Z4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ncapd2Q8K2Z4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ncapd2Q8K2Z4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ncapd2Q8K2Z4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ncapd2Q8K2Z4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ncapd2Q8K2Z4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ncapd2Q8K2Z4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC21.49■■□□□ 1.03
Ncapd2Q8K2Z4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Gm5648-201ENSMUST00000122244 1587 ntBASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Gm43548-201ENSMUST00000197139 2353 ntBASIC21.48■■□□□ 1.03
Ncapd2Q8K2Z4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ncapd2Q8K2Z4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ncapd2Q8K2Z4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ncapd2Q8K2Z4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ncapd2Q8K2Z4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ncapd2Q8K2Z4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ncapd2Q8K2Z4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
Ncapd2Q8K2Z4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ncapd2Q8K2Z4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Ncapd2Q8K2Z4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC21.47■■□□□ 1.03
Ncapd2Q8K2Z4 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Ncapd2Q8K2Z4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ncapd2Q8K2Z4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ncapd2Q8K2Z4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
Ncapd2Q8K2Z4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC21.47■■□□□ 1.03
Ncapd2Q8K2Z4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ncapd2Q8K2Z4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ncapd2Q8K2Z4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ncapd2Q8K2Z4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ncapd2Q8K2Z4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ncapd2Q8K2Z4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ncapd2Q8K2Z4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ncapd2Q8K2Z4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ncapd2Q8K2Z4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC21.46■■□□□ 1.03
Ncapd2Q8K2Z4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC21.46■■□□□ 1.03
Ncapd2Q8K2Z4 Gm27646-201ENSMUST00000183989 110 ntBASIC21.46■■□□□ 1.03
Ncapd2Q8K2Z4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC21.46■■□□□ 1.03
Ncapd2Q8K2Z4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ncapd2Q8K2Z4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ncapd2Q8K2Z4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ncapd2Q8K2Z4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ncapd2Q8K2Z4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ncapd2Q8K2Z4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ncapd2Q8K2Z4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms