Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Gm11539-201ENSMUST00000119837 557 ntBASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Gm30025-201ENSMUST00000218555 728 ntBASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hmgcs1Q8JZK9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Hmgcs1Q8JZK9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Hmgcs1Q8JZK9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hmgcs1Q8JZK9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Gm37055-201ENSMUST00000191866 133 ntBASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hmgcs1Q8JZK9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms