Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rbm28Q8CGC6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Rbm28Q8CGC6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rbm28Q8CGC6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rbm28Q8CGC6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rbm28Q8CGC6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rbm28Q8CGC6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.33■□□□□ 0.69
Rbm28Q8CGC6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rbm28Q8CGC6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rbm28Q8CGC6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rbm28Q8CGC6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.33■□□□□ 0.68
Rbm28Q8CGC6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rbm28Q8CGC6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rbm28Q8CGC6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Rbm28Q8CGC6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rbm28Q8CGC6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rbm28Q8CGC6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rbm28Q8CGC6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.33■□□□□ 0.68
Rbm28Q8CGC6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rbm28Q8CGC6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rbm28Q8CGC6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rbm28Q8CGC6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rbm28Q8CGC6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rbm28Q8CGC6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rbm28Q8CGC6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.32■□□□□ 0.68
Rbm28Q8CGC6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rbm28Q8CGC6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rbm28Q8CGC6 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.32■□□□□ 0.68
Rbm28Q8CGC6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rbm28Q8CGC6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rbm28Q8CGC6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Rbm28Q8CGC6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rbm28Q8CGC6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rbm28Q8CGC6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rbm28Q8CGC6 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.31■□□□□ 0.68
Rbm28Q8CGC6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rbm28Q8CGC6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
Rbm28Q8CGC6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rbm28Q8CGC6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.31■□□□□ 0.68
Rbm28Q8CGC6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rbm28Q8CGC6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rbm28Q8CGC6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Rbm28Q8CGC6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rbm28Q8CGC6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rbm28Q8CGC6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rbm28Q8CGC6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rbm28Q8CGC6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rbm28Q8CGC6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rbm28Q8CGC6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rbm28Q8CGC6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.3■□□□□ 0.68
Rbm28Q8CGC6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rbm28Q8CGC6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.3■□□□□ 0.68
Rbm28Q8CGC6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.3■□□□□ 0.68
Rbm28Q8CGC6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rbm28Q8CGC6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rbm28Q8CGC6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rbm28Q8CGC6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rbm28Q8CGC6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rbm28Q8CGC6 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Gm27459-201ENSMUST00000184860 107 ntBASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbm28Q8CGC6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms