Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ShfQ8CG80 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
ShfQ8CG80 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.61□□□□□ -0.07
ShfQ8CG80 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ShfQ8CG80 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
ShfQ8CG80 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ShfQ8CG80 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.61□□□□□ -0.07
ShfQ8CG80 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.61□□□□□ -0.07
ShfQ8CG80 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
ShfQ8CG80 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ShfQ8CG80 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.6□□□□□ -0.07
ShfQ8CG80 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ShfQ8CG80 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.6□□□□□ -0.07
ShfQ8CG80 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.6□□□□□ -0.07
ShfQ8CG80 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.6□□□□□ -0.07
ShfQ8CG80 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ShfQ8CG80 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.6□□□□□ -0.07
ShfQ8CG80 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ShfQ8CG80 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ShfQ8CG80 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ShfQ8CG80 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Gm29257-201ENSMUST00000186115 639 ntBASIC14.59□□□□□ -0.07
ShfQ8CG80 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.59□□□□□ -0.07
ShfQ8CG80 Gm7370-201ENSMUST00000219471 767 ntBASIC14.59□□□□□ -0.07
ShfQ8CG80 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.59□□□□□ -0.07
ShfQ8CG80 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.59□□□□□ -0.07
ShfQ8CG80 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShfQ8CG80 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ShfQ8CG80 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ShfQ8CG80 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
ShfQ8CG80 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
ShfQ8CG80 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.58□□□□□ -0.07
ShfQ8CG80 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.58□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms