Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Smc5Q8CG46 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Smc5Q8CG46 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc5Q8CG46 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smc5Q8CG46 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc5Q8CG46 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smc5Q8CG46 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc5Q8CG46 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc5Q8CG46 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Smc5Q8CG46 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc5Q8CG46 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc5Q8CG46 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc5Q8CG46 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc5Q8CG46 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smc5Q8CG46 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc5Q8CG46 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smc5Q8CG46 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.27■□□□□ 0.84
Smc5Q8CG46 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smc5Q8CG46 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.27■□□□□ 0.84
Smc5Q8CG46 Gm29257-201ENSMUST00000186115 639 ntBASIC20.27■□□□□ 0.84
Smc5Q8CG46 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc5Q8CG46 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc5Q8CG46 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Smc5Q8CG46 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc5Q8CG46 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc5Q8CG46 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Smc5Q8CG46 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Smc5Q8CG46 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smc5Q8CG46 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Smc5Q8CG46 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC20.27■□□□□ 0.83
Smc5Q8CG46 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smc5Q8CG46 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smc5Q8CG46 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc5Q8CG46 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smc5Q8CG46 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc5Q8CG46 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.26■□□□□ 0.83
Smc5Q8CG46 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.26■□□□□ 0.83
Smc5Q8CG46 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smc5Q8CG46 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.26■□□□□ 0.83
Smc5Q8CG46 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc5Q8CG46 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc5Q8CG46 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc5Q8CG46 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc5Q8CG46 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Smc5Q8CG46 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc5Q8CG46 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.26■□□□□ 0.83
Smc5Q8CG46 App-207ENSMUST00000227737 2827 ntBASIC20.26■□□□□ 0.83
Smc5Q8CG46 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc5Q8CG46 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC20.25■□□□□ 0.83
Smc5Q8CG46 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smc5Q8CG46 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Smc5Q8CG46 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc5Q8CG46 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.25■□□□□ 0.83
Smc5Q8CG46 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.25■□□□□ 0.83
Smc5Q8CG46 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.25■□□□□ 0.83
Smc5Q8CG46 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.25■□□□□ 0.83
Smc5Q8CG46 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc5Q8CG46 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smc5Q8CG46 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc5Q8CG46 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Smc5Q8CG46 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
Smc5Q8CG46 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc5Q8CG46 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc5Q8CG46 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc5Q8CG46 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Smc5Q8CG46 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc5Q8CG46 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc5Q8CG46 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.24■□□□□ 0.83
Smc5Q8CG46 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smc5Q8CG46 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc5Q8CG46 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smc5Q8CG46 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smc5Q8CG46 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smc5Q8CG46 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc5Q8CG46 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc5Q8CG46 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc5Q8CG46 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smc5Q8CG46 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Smc5Q8CG46 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.24■□□□□ 0.83
Smc5Q8CG46 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smc5Q8CG46 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Smc5Q8CG46 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc5Q8CG46 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc5Q8CG46 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc5Q8CG46 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smc5Q8CG46 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smc5Q8CG46 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc5Q8CG46 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc5Q8CG46 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc5Q8CG46 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc5Q8CG46 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc5Q8CG46 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc5Q8CG46 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc5Q8CG46 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smc5Q8CG46 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smc5Q8CG46 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.23■□□□□ 0.83
Smc5Q8CG46 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.23■□□□□ 0.83
Smc5Q8CG46 Gm10566-201ENSMUST00000086739 996 ntBASIC20.23■□□□□ 0.83
Smc5Q8CG46 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smc5Q8CG46 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms