Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc28aQ8CEI3 Gm7791-201ENSMUST00000219066 539 ntBASIC17.3■□□□□ 0.36
Ccdc28aQ8CEI3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc28aQ8CEI3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc28aQ8CEI3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc28aQ8CEI3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc28aQ8CEI3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc28aQ8CEI3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc28aQ8CEI3 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.3■□□□□ 0.36
Ccdc28aQ8CEI3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc28aQ8CEI3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc28aQ8CEI3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc28aQ8CEI3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ccdc28aQ8CEI3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc28aQ8CEI3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ccdc28aQ8CEI3 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.29■□□□□ 0.36
Ccdc28aQ8CEI3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc28aQ8CEI3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ccdc28aQ8CEI3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc28aQ8CEI3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc28aQ8CEI3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ccdc28aQ8CEI3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc28aQ8CEI3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.29■□□□□ 0.36
Ccdc28aQ8CEI3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc28aQ8CEI3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc28aQ8CEI3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc28aQ8CEI3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc28aQ8CEI3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc28aQ8CEI3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc28aQ8CEI3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ccdc28aQ8CEI3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28aQ8CEI3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28aQ8CEI3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28aQ8CEI3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.28■□□□□ 0.36
Ccdc28aQ8CEI3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28aQ8CEI3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28aQ8CEI3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc28aQ8CEI3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.28■□□□□ 0.36
Ccdc28aQ8CEI3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc28aQ8CEI3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.28■□□□□ 0.36
Ccdc28aQ8CEI3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28aQ8CEI3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28aQ8CEI3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28aQ8CEI3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28aQ8CEI3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28aQ8CEI3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28aQ8CEI3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc28aQ8CEI3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28aQ8CEI3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 Actl10-202ENSMUST00000226583 1501 ntBASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28aQ8CEI3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc28aQ8CEI3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc28aQ8CEI3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc28aQ8CEI3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28aQ8CEI3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms