Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rsph6aQ8CDR2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Rsph6aQ8CDR2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Rsph6aQ8CDR2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Rsph6aQ8CDR2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Rsph6aQ8CDR2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph6aQ8CDR2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph6aQ8CDR2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Rsph6aQ8CDR2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph6aQ8CDR2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph6aQ8CDR2 Gm18856-201ENSMUST00000178096 1374 ntBASIC21.26■□□□□ 0.99
Rsph6aQ8CDR2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph6aQ8CDR2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph6aQ8CDR2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph6aQ8CDR2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC21.26■□□□□ 0.99
Rsph6aQ8CDR2 Gm2651-201ENSMUST00000203560 838 ntBASIC21.26■□□□□ 0.99
Rsph6aQ8CDR2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph6aQ8CDR2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rsph6aQ8CDR2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph6aQ8CDR2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph6aQ8CDR2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph6aQ8CDR2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rsph6aQ8CDR2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph6aQ8CDR2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph6aQ8CDR2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.25■□□□□ 0.99
Rsph6aQ8CDR2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph6aQ8CDR2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph6aQ8CDR2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph6aQ8CDR2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph6aQ8CDR2 Gm4459-201ENSMUST00000118750 468 ntBASIC21.25■□□□□ 0.99
Rsph6aQ8CDR2 Gm13418-201ENSMUST00000119097 944 ntBASIC21.25■□□□□ 0.99
Rsph6aQ8CDR2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC21.25■□□□□ 0.99
Rsph6aQ8CDR2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC21.25■□□□□ 0.99
Rsph6aQ8CDR2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph6aQ8CDR2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph6aQ8CDR2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph6aQ8CDR2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph6aQ8CDR2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rsph6aQ8CDR2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 Gm12497-201ENSMUST00000138778 237 ntBASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 Mir5131-201ENSMUST00000175426 93 ntBASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 Gm10060-201ENSMUST00000212002 111 ntBASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Rsph6aQ8CDR2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Rsph6aQ8CDR2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rsph6aQ8CDR2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rsph6aQ8CDR2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rsph6aQ8CDR2 Gm25990-201ENSMUST00000102440 86 ntBASIC21.23■□□□□ 0.99
Rsph6aQ8CDR2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC21.23■□□□□ 0.99
Rsph6aQ8CDR2 Gm4535-201ENSMUST00000182274 558 ntBASIC21.23■□□□□ 0.99
Rsph6aQ8CDR2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rsph6aQ8CDR2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rsph6aQ8CDR2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC21.23■□□□□ 0.99
Rsph6aQ8CDR2 Gm10355-201ENSMUST00000097146 517 ntBASIC21.23■□□□□ 0.99
Rsph6aQ8CDR2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rsph6aQ8CDR2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rsph6aQ8CDR2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rsph6aQ8CDR2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rsph6aQ8CDR2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rsph6aQ8CDR2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rsph6aQ8CDR2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Gm8097-201ENSMUST00000117903 829 ntBASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Gm6443-201ENSMUST00000203599 874 ntBASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rsph6aQ8CDR2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms