Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Mir770-201ENSMUST00000103252 94 ntBASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp43Q8BUM9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Usp43Q8BUM9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Usp43Q8BUM9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Usp43Q8BUM9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Usp43Q8BUM9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp43Q8BUM9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp43Q8BUM9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.58■□□□□ 0.24
Usp43Q8BUM9 Gm5587-201ENSMUST00000206270 674 ntBASIC16.58■□□□□ 0.24
Usp43Q8BUM9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp43Q8BUM9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Usp43Q8BUM9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Usp43Q8BUM9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp43Q8BUM9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Usp43Q8BUM9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.58■□□□□ 0.24
Usp43Q8BUM9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp43Q8BUM9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp43Q8BUM9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Usp43Q8BUM9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp43Q8BUM9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp43Q8BUM9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Usp43Q8BUM9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp43Q8BUM9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Gm13836-201ENSMUST00000121159 501 ntBASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp43Q8BUM9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp43Q8BUM9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Usp43Q8BUM9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp43Q8BUM9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Usp43Q8BUM9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp43Q8BUM9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.56■□□□□ 0.24
Usp43Q8BUM9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp43Q8BUM9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Usp43Q8BUM9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Usp43Q8BUM9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Usp43Q8BUM9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Usp43Q8BUM9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Usp43Q8BUM9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Usp43Q8BUM9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Usp43Q8BUM9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp43Q8BUM9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Usp43Q8BUM9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp43Q8BUM9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp43Q8BUM9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms