Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scfd1Q8BRF7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scfd1Q8BRF7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scfd1Q8BRF7 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.67■□□□□ 0.58
Scfd1Q8BRF7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scfd1Q8BRF7 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Gm6443-201ENSMUST00000203599 874 ntBASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scfd1Q8BRF7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scfd1Q8BRF7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scfd1Q8BRF7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.64■□□□□ 0.58
Scfd1Q8BRF7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scfd1Q8BRF7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scfd1Q8BRF7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.64■□□□□ 0.57
Scfd1Q8BRF7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Scfd1Q8BRF7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scfd1Q8BRF7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scfd1Q8BRF7 Gm25406-201ENSMUST00000157599 105 ntBASIC18.64■□□□□ 0.57
Scfd1Q8BRF7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scfd1Q8BRF7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scfd1Q8BRF7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.64■□□□□ 0.57
Scfd1Q8BRF7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scfd1Q8BRF7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Scfd1Q8BRF7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scfd1Q8BRF7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scfd1Q8BRF7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scfd1Q8BRF7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Scfd1Q8BRF7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Gm12497-201ENSMUST00000138778 237 ntBASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Mir6404-201ENSMUST00000183699 94 ntBASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Gm43514-201ENSMUST00000198852 424 ntBASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Gm9172-201ENSMUST00000212092 954 ntBASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scfd1Q8BRF7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scfd1Q8BRF7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scfd1Q8BRF7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scfd1Q8BRF7 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.62■□□□□ 0.57
Scfd1Q8BRF7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.62■□□□□ 0.57
Scfd1Q8BRF7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scfd1Q8BRF7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scfd1Q8BRF7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scfd1Q8BRF7 Gm4459-201ENSMUST00000118750 468 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms