Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim23Q8BGX0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim23Q8BGX0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim23Q8BGX0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim23Q8BGX0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim23Q8BGX0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Gm10819-201ENSMUST00000099988 561 ntBASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim23Q8BGX0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim23Q8BGX0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim23Q8BGX0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim23Q8BGX0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trim23Q8BGX0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trim23Q8BGX0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim23Q8BGX0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.77■□□□□ 0.12
Trim23Q8BGX0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.77■□□□□ 0.12
Trim23Q8BGX0 Mir3081-201ENSMUST00000175305 84 ntBASIC15.77■□□□□ 0.12
Trim23Q8BGX0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trim23Q8BGX0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim23Q8BGX0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim23Q8BGX0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim23Q8BGX0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim23Q8BGX0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim23Q8BGX0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim23Q8BGX0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim23Q8BGX0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Trim23Q8BGX0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
Trim23Q8BGX0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.77■□□□□ 0.11
Trim23Q8BGX0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim23Q8BGX0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trim23Q8BGX0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim23Q8BGX0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim23Q8BGX0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim23Q8BGX0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Gm13312-201ENSMUST00000119631 718 ntBASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim23Q8BGX0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Gm9103-201ENSMUST00000119371 405 ntBASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Gm18669-201ENSMUST00000216049 778 ntBASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim23Q8BGX0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms