Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Samm50Q8BGH2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Samm50Q8BGH2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Samm50Q8BGH2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Samm50Q8BGH2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Samm50Q8BGH2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Samm50Q8BGH2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Samm50Q8BGH2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Gm18958-201ENSMUST00000174258 762 ntBASIC19.2■□□□□ 0.66
Samm50Q8BGH2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Samm50Q8BGH2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Samm50Q8BGH2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
Samm50Q8BGH2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Samm50Q8BGH2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Samm50Q8BGH2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Samm50Q8BGH2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.19■□□□□ 0.66
Samm50Q8BGH2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.19■□□□□ 0.66
Samm50Q8BGH2 Gm18101-201ENSMUST00000215769 548 ntBASIC19.19■□□□□ 0.66
Samm50Q8BGH2 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.19■□□□□ 0.66
Samm50Q8BGH2 Gm7370-201ENSMUST00000219471 767 ntBASIC19.19■□□□□ 0.66
Samm50Q8BGH2 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.19■□□□□ 0.66
Samm50Q8BGH2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Samm50Q8BGH2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Samm50Q8BGH2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Samm50Q8BGH2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Samm50Q8BGH2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Samm50Q8BGH2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.19■□□□□ 0.66
Samm50Q8BGH2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Samm50Q8BGH2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Samm50Q8BGH2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Gm10013-201ENSMUST00000106074 672 ntBASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Gm22697-201ENSMUST00000175194 63 ntBASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Samm50Q8BGH2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Samm50Q8BGH2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms