Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.36■□□□□ 0.21
Rpp38Q80UU2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp38Q80UU2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp38Q80UU2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp38Q80UU2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp38Q80UU2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp38Q80UU2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp38Q80UU2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp38Q80UU2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp38Q80UU2 Gm17808-201ENSMUST00000200859 894 ntBASIC16.36■□□□□ 0.21
Rpp38Q80UU2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp38Q80UU2 Gm45328-201ENSMUST00000210942 917 ntBASIC16.36■□□□□ 0.21
Rpp38Q80UU2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp38Q80UU2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp38Q80UU2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp38Q80UU2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp38Q80UU2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpp38Q80UU2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rpp38Q80UU2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rpp38Q80UU2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpp38Q80UU2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpp38Q80UU2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rpp38Q80UU2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rpp38Q80UU2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rpp38Q80UU2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp38Q80UU2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp38Q80UU2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.33■□□□□ 0.2
Rpp38Q80UU2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp38Q80UU2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp38Q80UU2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp38Q80UU2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp38Q80UU2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Rpp38Q80UU2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp38Q80UU2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp38Q80UU2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp38Q80UU2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp38Q80UU2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp38Q80UU2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpp38Q80UU2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rpp38Q80UU2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rpp38Q80UU2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms