Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ush1gQ80T11 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.87■□□□□ 0.45
Ush1gQ80T11 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ush1gQ80T11 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ush1gQ80T11 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ush1gQ80T11 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.86■□□□□ 0.45
Ush1gQ80T11 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.86■□□□□ 0.45
Ush1gQ80T11 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ush1gQ80T11 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ush1gQ80T11 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ush1gQ80T11 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Ush1gQ80T11 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Ush1gQ80T11 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ush1gQ80T11 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ush1gQ80T11 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ush1gQ80T11 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.85■□□□□ 0.45
Ush1gQ80T11 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ush1gQ80T11 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.85■□□□□ 0.45
Ush1gQ80T11 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.85■□□□□ 0.45
Ush1gQ80T11 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ush1gQ80T11 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ush1gQ80T11 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ush1gQ80T11 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ush1gQ80T11 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ush1gQ80T11 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ush1gQ80T11 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.84■□□□□ 0.45
Ush1gQ80T11 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ush1gQ80T11 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ush1gQ80T11 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ush1gQ80T11 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ush1gQ80T11 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Ush1gQ80T11 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.83■□□□□ 0.45
Ush1gQ80T11 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ush1gQ80T11 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ush1gQ80T11 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ush1gQ80T11 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ush1gQ80T11 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Ush1gQ80T11 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ush1gQ80T11 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ush1gQ80T11 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.83■□□□□ 0.44
Ush1gQ80T11 Gm27525-201ENSMUST00000184465 107 ntBASIC17.83■□□□□ 0.44
Ush1gQ80T11 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ush1gQ80T11 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ush1gQ80T11 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ush1gQ80T11 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms