Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.07■□□□□ 0
Pif1Q80SX8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pif1Q80SX8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pif1Q80SX8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pif1Q80SX8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pif1Q80SX8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pif1Q80SX8 Gm15165-201ENSMUST00000118140 502 ntBASIC15.07■□□□□ 0
Pif1Q80SX8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pif1Q80SX8 Gm44454-201ENSMUST00000198541 138 ntBASIC15.07■□□□□ 0
Pif1Q80SX8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pif1Q80SX8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pif1Q80SX8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.07■□□□□ 0
Pif1Q80SX8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pif1Q80SX8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pif1Q80SX8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pif1Q80SX8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.07■□□□□ 0
Pif1Q80SX8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pif1Q80SX8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.07■□□□□ 0
Pif1Q80SX8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pif1Q80SX8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pif1Q80SX8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pif1Q80SX8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pif1Q80SX8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pif1Q80SX8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Pif1Q80SX8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pif1Q80SX8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pif1Q80SX8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pif1Q80SX8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pif1Q80SX8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pif1Q80SX8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pif1Q80SX8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pif1Q80SX8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pif1Q80SX8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pif1Q80SX8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pif1Q80SX8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pif1Q80SX8 Gm44430-201ENSMUST00000203376 995 ntBASIC15.06■□□□□ 0
Pif1Q80SX8 Gm6296-201ENSMUST00000222599 943 ntBASIC15.06■□□□□ 0
Pif1Q80SX8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pif1Q80SX8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pif1Q80SX8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.06■□□□□ 0
Pif1Q80SX8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pif1Q80SX8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pif1Q80SX8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pif1Q80SX8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pif1Q80SX8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pif1Q80SX8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pif1Q80SX8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pif1Q80SX8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pif1Q80SX8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.06■□□□□ 0
Pif1Q80SX8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pif1Q80SX8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Pif1Q80SX8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pif1Q80SX8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Pif1Q80SX8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Pif1Q80SX8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Pif1Q80SX8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Pif1Q80SX8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Pif1Q80SX8 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.05■□□□□ 0
Pif1Q80SX8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pif1Q80SX8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pif1Q80SX8 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pif1Q80SX8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Pif1Q80SX8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pif1Q80SX8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pif1Q80SX8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Pif1Q80SX8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pif1Q80SX8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pif1Q80SX8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pif1Q80SX8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pif1Q80SX8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pif1Q80SX8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.05■□□□□ -0
Pif1Q80SX8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Pif1Q80SX8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pif1Q80SX8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pif1Q80SX8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pif1Q80SX8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Pif1Q80SX8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pif1Q80SX8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pif1Q80SX8 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.04■□□□□ -0
Pif1Q80SX8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pif1Q80SX8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pif1Q80SX8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pif1Q80SX8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pif1Q80SX8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pif1Q80SX8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pif1Q80SX8 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.04■□□□□ -0
Pif1Q80SX8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pif1Q80SX8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.04■□□□□ -0
Pif1Q80SX8 Gm7862-201ENSMUST00000121461 292 ntBASIC15.04■□□□□ -0
Pif1Q80SX8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pif1Q80SX8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pif1Q80SX8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pif1Q80SX8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pif1Q80SX8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pif1Q80SX8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.04■□□□□ -0
Pif1Q80SX8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pif1Q80SX8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pif1Q80SX8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pif1Q80SX8 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.04■□□□□ -0
Pif1Q80SX8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms