Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Gm8825-201ENSMUST00000182565 998 ntBASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Gm4518-201ENSMUST00000182638 718 ntBASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.34■□□□□ 0.69
Nup188Q6ZQH8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup188Q6ZQH8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup188Q6ZQH8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup188Q6ZQH8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup188Q6ZQH8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup188Q6ZQH8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.33■□□□□ 0.69
Nup188Q6ZQH8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup188Q6ZQH8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.33■□□□□ 0.68
Nup188Q6ZQH8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.33■□□□□ 0.68
Nup188Q6ZQH8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup188Q6ZQH8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup188Q6ZQH8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nup188Q6ZQH8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Nup188Q6ZQH8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup188Q6ZQH8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Gm9682-201ENSMUST00000197505 556 ntBASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup188Q6ZQH8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup188Q6ZQH8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nup188Q6ZQH8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nup188Q6ZQH8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.3■□□□□ 0.68
Nup188Q6ZQH8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup188Q6ZQH8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup188Q6ZQH8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nup188Q6ZQH8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup188Q6ZQH8 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.3■□□□□ 0.68
Nup188Q6ZQH8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms