Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx55Q6ZPL9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Ddx55Q6ZPL9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx55Q6ZPL9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx55Q6ZPL9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx55Q6ZPL9 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.58■□□□□ 0.56
Ddx55Q6ZPL9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx55Q6ZPL9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ddx55Q6ZPL9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Ddx55Q6ZPL9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Ddx55Q6ZPL9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ddx55Q6ZPL9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Gm10576-201ENSMUST00000191927 825 ntBASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
Ddx55Q6ZPL9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 Gm7063-201ENSMUST00000186840 981 ntBASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 Chchd1-203ENSMUST00000224633 557 ntBASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.55■□□□□ 0.56
Ddx55Q6ZPL9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Ddx55Q6ZPL9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms