Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Npc1l1Q6T3U4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1l1Q6T3U4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1l1Q6T3U4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1l1Q6T3U4 Gm27525-201ENSMUST00000184465 107 ntBASIC19.56■□□□□ 0.72
Npc1l1Q6T3U4 Gm18195-201ENSMUST00000207604 706 ntBASIC19.56■□□□□ 0.72
Npc1l1Q6T3U4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.56■□□□□ 0.72
Npc1l1Q6T3U4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.56■□□□□ 0.72
Npc1l1Q6T3U4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.56■□□□□ 0.72
Npc1l1Q6T3U4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1l1Q6T3U4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1l1Q6T3U4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1l1Q6T3U4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1l1Q6T3U4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1l1Q6T3U4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1l1Q6T3U4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1l1Q6T3U4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Npc1l1Q6T3U4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1l1Q6T3U4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Npc1l1Q6T3U4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Npc1l1Q6T3U4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Npc1l1Q6T3U4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.55■□□□□ 0.72
Npc1l1Q6T3U4 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.55■□□□□ 0.72
Npc1l1Q6T3U4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Npc1l1Q6T3U4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Npc1l1Q6T3U4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Npc1l1Q6T3U4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Npc1l1Q6T3U4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Npc1l1Q6T3U4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Npc1l1Q6T3U4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Npc1l1Q6T3U4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Npc1l1Q6T3U4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Npc1l1Q6T3U4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Npc1l1Q6T3U4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Npc1l1Q6T3U4 Gm44454-201ENSMUST00000198541 138 ntBASIC19.54■□□□□ 0.72
Npc1l1Q6T3U4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.54■□□□□ 0.72
Npc1l1Q6T3U4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.54■□□□□ 0.72
Npc1l1Q6T3U4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Npc1l1Q6T3U4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Npc1l1Q6T3U4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.54■□□□□ 0.72
Npc1l1Q6T3U4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Npc1l1Q6T3U4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Npc1l1Q6T3U4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Npc1l1Q6T3U4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Npc1l1Q6T3U4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.54■□□□□ 0.72
Npc1l1Q6T3U4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Npc1l1Q6T3U4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Npc1l1Q6T3U4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Npc1l1Q6T3U4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Npc1l1Q6T3U4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Npc1l1Q6T3U4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Npc1l1Q6T3U4 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.53■□□□□ 0.72
Npc1l1Q6T3U4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Npc1l1Q6T3U4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.53■□□□□ 0.72
Npc1l1Q6T3U4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.53■□□□□ 0.72
Npc1l1Q6T3U4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Npc1l1Q6T3U4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Npc1l1Q6T3U4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.53■□□□□ 0.72
Npc1l1Q6T3U4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Npc1l1Q6T3U4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Npc1l1Q6T3U4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Npc1l1Q6T3U4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Npc1l1Q6T3U4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Npc1l1Q6T3U4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Npc1l1Q6T3U4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Npc1l1Q6T3U4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Npc1l1Q6T3U4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Npc1l1Q6T3U4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Npc1l1Q6T3U4 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.52■□□□□ 0.72
Npc1l1Q6T3U4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Npc1l1Q6T3U4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Npc1l1Q6T3U4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Npc1l1Q6T3U4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Npc1l1Q6T3U4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.52■□□□□ 0.72
Npc1l1Q6T3U4 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.52■□□□□ 0.72
Npc1l1Q6T3U4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Npc1l1Q6T3U4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Npc1l1Q6T3U4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Npc1l1Q6T3U4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Npc1l1Q6T3U4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Npc1l1Q6T3U4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Npc1l1Q6T3U4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Npc1l1Q6T3U4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npc1l1Q6T3U4 Gm15165-201ENSMUST00000118140 502 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms