Protein–RNA interactions for Protein: Q6PE55

Pdgfrl, Platelet-derived growth factor receptor-like protein, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrlQ6PE55 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Gm4459-201ENSMUST00000118750 468 ntBASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.84■□□□□ 0.29
PdgfrlQ6PE55 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PdgfrlQ6PE55 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PdgfrlQ6PE55 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PdgfrlQ6PE55 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PdgfrlQ6PE55 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PdgfrlQ6PE55 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PdgfrlQ6PE55 Gm8097-201ENSMUST00000117903 829 ntBASIC16.83■□□□□ 0.28
PdgfrlQ6PE55 Gm15173-201ENSMUST00000122049 433 ntBASIC16.83■□□□□ 0.28
PdgfrlQ6PE55 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.83■□□□□ 0.28
PdgfrlQ6PE55 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PdgfrlQ6PE55 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PdgfrlQ6PE55 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.83■□□□□ 0.28
PdgfrlQ6PE55 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PdgfrlQ6PE55 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PdgfrlQ6PE55 Gm37935-201ENSMUST00000192012 982 ntBASIC16.83■□□□□ 0.28
PdgfrlQ6PE55 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.83■□□□□ 0.28
PdgfrlQ6PE55 Gm8655-201ENSMUST00000221159 852 ntBASIC16.83■□□□□ 0.28
PdgfrlQ6PE55 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.83■□□□□ 0.28
PdgfrlQ6PE55 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PdgfrlQ6PE55 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 Gm25406-201ENSMUST00000157599 105 ntBASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PdgfrlQ6PE55 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Gm8000-201ENSMUST00000188378 592 ntBASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Gm5364-201ENSMUST00000216789 889 ntBASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PdgfrlQ6PE55 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PdgfrlQ6PE55 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.8■□□□□ 0.28
PdgfrlQ6PE55 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PdgfrlQ6PE55 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PdgfrlQ6PE55 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PdgfrlQ6PE55 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms