Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Snrnp40Q6PE01 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Gm26308-201ENSMUST00000157768 69 ntBASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Gm8969-201ENSMUST00000199694 526 ntBASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snrnp40Q6PE01 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Gm25911-201ENSMUST00000157621 56 ntBASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Snrnp40Q6PE01 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snrnp40Q6PE01 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Snrnp40Q6PE01 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snrnp40Q6PE01 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Snrnp40Q6PE01 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Snrnp40Q6PE01 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.35□□□□□ -0.11
Snrnp40Q6PE01 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Snrnp40Q6PE01 Gm7063-201ENSMUST00000186840 981 ntBASIC14.35□□□□□ -0.11
Snrnp40Q6PE01 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Snrnp40Q6PE01 Gm10576-201ENSMUST00000191927 825 ntBASIC14.35□□□□□ -0.11
Snrnp40Q6PE01 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Snrnp40Q6PE01 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Snrnp40Q6PE01 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snrnp40Q6PE01 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Snrnp40Q6PE01 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snrnp40Q6PE01 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Gm25406-201ENSMUST00000157599 105 ntBASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Gm10175-201ENSMUST00000086013 645 ntBASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snrnp40Q6PE01 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.33□□□□□ -0.11
Snrnp40Q6PE01 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Snrnp40Q6PE01 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Snrnp40Q6PE01 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Snrnp40Q6PE01 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snrnp40Q6PE01 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snrnp40Q6PE01 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms