Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rtl3Q6P1Y1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Gm7461-201ENSMUST00000058918 827 ntBASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.91■□□□□ 0.3
Rtl3Q6P1Y1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtl3Q6P1Y1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Rtl3Q6P1Y1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtl3Q6P1Y1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.9■□□□□ 0.3
Rtl3Q6P1Y1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtl3Q6P1Y1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.9■□□□□ 0.3
Rtl3Q6P1Y1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.9■□□□□ 0.3
Rtl3Q6P1Y1 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.9■□□□□ 0.3
Rtl3Q6P1Y1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtl3Q6P1Y1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtl3Q6P1Y1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtl3Q6P1Y1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Rtl3Q6P1Y1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtl3Q6P1Y1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rtl3Q6P1Y1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtl3Q6P1Y1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.9■□□□□ 0.3
Rtl3Q6P1Y1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rtl3Q6P1Y1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rtl3Q6P1Y1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 Mir3081-201ENSMUST00000175305 84 ntBASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtl3Q6P1Y1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 Gm27742-201ENSMUST00000184667 60 ntBASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Rtl3Q6P1Y1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtl3Q6P1Y1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms