Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Krt40Q6IFX3 Gm7862-201ENSMUST00000121461 292 ntBASIC19.21■□□□□ 0.67
Krt40Q6IFX3 Gm25406-201ENSMUST00000157599 105 ntBASIC19.21■□□□□ 0.67
Krt40Q6IFX3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.21■□□□□ 0.67
Krt40Q6IFX3 Gm6376-201ENSMUST00000209407 580 ntBASIC19.21■□□□□ 0.67
Krt40Q6IFX3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.21■□□□□ 0.67
Krt40Q6IFX3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt40Q6IFX3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt40Q6IFX3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt40Q6IFX3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.21■□□□□ 0.67
Krt40Q6IFX3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt40Q6IFX3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt40Q6IFX3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.21■□□□□ 0.67
Krt40Q6IFX3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt40Q6IFX3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt40Q6IFX3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt40Q6IFX3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt40Q6IFX3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt40Q6IFX3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt40Q6IFX3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt40Q6IFX3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.2■□□□□ 0.66
Krt40Q6IFX3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.2■□□□□ 0.66
Krt40Q6IFX3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Krt40Q6IFX3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Krt40Q6IFX3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.2■□□□□ 0.66
Krt40Q6IFX3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Krt40Q6IFX3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt40Q6IFX3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt40Q6IFX3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt40Q6IFX3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Krt40Q6IFX3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt40Q6IFX3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt40Q6IFX3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt40Q6IFX3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt40Q6IFX3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt40Q6IFX3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.19■□□□□ 0.66
Krt40Q6IFX3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt40Q6IFX3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.19■□□□□ 0.66
Krt40Q6IFX3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.19■□□□□ 0.66
Krt40Q6IFX3 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.19■□□□□ 0.66
Krt40Q6IFX3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt40Q6IFX3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt40Q6IFX3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Krt40Q6IFX3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt40Q6IFX3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.19■□□□□ 0.66
Krt40Q6IFX3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt40Q6IFX3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt40Q6IFX3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Krt40Q6IFX3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Krt40Q6IFX3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.19■□□□□ 0.66
Krt40Q6IFX3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Gm18195-201ENSMUST00000207604 706 ntBASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Gm9172-201ENSMUST00000212092 954 ntBASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt40Q6IFX3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt40Q6IFX3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Krt40Q6IFX3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Krt40Q6IFX3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.17■□□□□ 0.66
Krt40Q6IFX3 Gm12497-201ENSMUST00000138778 237 ntBASIC19.17■□□□□ 0.66
Krt40Q6IFX3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt40Q6IFX3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt40Q6IFX3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Krt40Q6IFX3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt40Q6IFX3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt40Q6IFX3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt40Q6IFX3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt40Q6IFX3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.17■□□□□ 0.66
Krt40Q6IFX3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt40Q6IFX3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Krt40Q6IFX3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt40Q6IFX3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt40Q6IFX3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Krt40Q6IFX3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt40Q6IFX3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt40Q6IFX3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt40Q6IFX3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt40Q6IFX3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.16■□□□□ 0.66
Krt40Q6IFX3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt40Q6IFX3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt40Q6IFX3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt40Q6IFX3 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.16■□□□□ 0.66
Krt40Q6IFX3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms