Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhga7Q6DD96 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga7Q6DD96 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhga7Q6DD96 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga7Q6DD96 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhga7Q6DD96 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga7Q6DD96 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga7Q6DD96 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdhga7Q6DD96 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga7Q6DD96 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga7Q6DD96 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga7Q6DD96 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga7Q6DD96 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga7Q6DD96 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 AC153937.1-201ENSMUST00000218734 412 ntBASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga7Q6DD96 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Actl10-202ENSMUST00000226583 1501 ntBASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga7Q6DD96 Phf7-203ENSMUST00000226565 1971 ntBASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.87■□□□□ 0.13
Pcdhga7Q6DD96 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Gm7370-201ENSMUST00000219471 767 ntBASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhga7Q6DD96 AC154532.1-201ENSMUST00000227860 965 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms