Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scube3Q66PY1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.17■□□□□ 0.34
Scube3Q66PY1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scube3Q66PY1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scube3Q66PY1 Gm25007-201ENSMUST00000083808 133 ntBASIC17.17■□□□□ 0.34
Scube3Q66PY1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scube3Q66PY1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scube3Q66PY1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scube3Q66PY1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scube3Q66PY1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scube3Q66PY1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Scube3Q66PY1 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.16■□□□□ 0.34
Scube3Q66PY1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scube3Q66PY1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scube3Q66PY1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scube3Q66PY1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.15■□□□□ 0.34
Scube3Q66PY1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.15■□□□□ 0.34
Scube3Q66PY1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.15■□□□□ 0.34
Scube3Q66PY1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scube3Q66PY1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.15■□□□□ 0.34
Scube3Q66PY1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Scube3Q66PY1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.15■□□□□ 0.34
Scube3Q66PY1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scube3Q66PY1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.15■□□□□ 0.34
Scube3Q66PY1 Gm36967-201ENSMUST00000193814 266 ntBASIC17.15■□□□□ 0.34
Scube3Q66PY1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scube3Q66PY1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Scube3Q66PY1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scube3Q66PY1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scube3Q66PY1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scube3Q66PY1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scube3Q66PY1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scube3Q66PY1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scube3Q66PY1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scube3Q66PY1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.34
Scube3Q66PY1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Gm17807-201ENSMUST00000186869 298 ntBASIC17.14■□□□□ 0.33
Scube3Q66PY1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scube3Q66PY1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Scube3Q66PY1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scube3Q66PY1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scube3Q66PY1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scube3Q66PY1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scube3Q66PY1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Scube3Q66PY1 Gm11434-201ENSMUST00000122379 629 ntBASIC17.13■□□□□ 0.33
Scube3Q66PY1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.13■□□□□ 0.33
Scube3Q66PY1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Scube3Q66PY1 AC073947.1-201ENSMUST00000216991 649 ntBASIC17.13■□□□□ 0.33
Scube3Q66PY1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scube3Q66PY1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scube3Q66PY1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Scube3Q66PY1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scube3Q66PY1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Scube3Q66PY1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scube3Q66PY1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.12■□□□□ 0.33
Scube3Q66PY1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scube3Q66PY1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms