Protein–RNA interactions for Protein: Q62395

Tff3, Trefoil factor 3, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff3Q62395 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.18□□□□□ -0.14
Tff3Q62395 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Tff3Q62395 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff3Q62395 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tff3Q62395 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff3Q62395 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tff3Q62395 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff3Q62395 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tff3Q62395 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff3Q62395 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff3Q62395 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.17□□□□□ -0.14
Tff3Q62395 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tff3Q62395 Gm11452-201ENSMUST00000122376 690 ntBASIC14.17□□□□□ -0.14
Tff3Q62395 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff3Q62395 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff3Q62395 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff3Q62395 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tff3Q62395 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.17□□□□□ -0.14
Tff3Q62395 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff3Q62395 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff3Q62395 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff3Q62395 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff3Q62395 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff3Q62395 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff3Q62395 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff3Q62395 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tff3Q62395 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tff3Q62395 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff3Q62395 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tff3Q62395 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tff3Q62395 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.16□□□□□ -0.14
Tff3Q62395 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tff3Q62395 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff3Q62395 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff3Q62395 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff3Q62395 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff3Q62395 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tff3Q62395 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.16□□□□□ -0.14
Tff3Q62395 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff3Q62395 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Tff3Q62395 Gm13884-201ENSMUST00000118103 829 ntBASIC14.16□□□□□ -0.14
Tff3Q62395 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff3Q62395 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tff3Q62395 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tff3Q62395 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Tff3Q62395 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.16□□□□□ -0.14
Tff3Q62395 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Tff3Q62395 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff3Q62395 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff3Q62395 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tff3Q62395 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.16□□□□□ -0.14
Tff3Q62395 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tff3Q62395 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff3Q62395 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tff3Q62395 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff3Q62395 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff3Q62395 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Tff3Q62395 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff3Q62395 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff3Q62395 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tff3Q62395 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff3Q62395 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff3Q62395 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tff3Q62395 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff3Q62395 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tff3Q62395 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.15□□□□□ -0.14
Tff3Q62395 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.15□□□□□ -0.14
Tff3Q62395 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.15□□□□□ -0.14
Tff3Q62395 Gm15165-201ENSMUST00000118140 502 ntBASIC14.15□□□□□ -0.14
Tff3Q62395 Gm15372-201ENSMUST00000120729 834 ntBASIC14.15□□□□□ -0.14
Tff3Q62395 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff3Q62395 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tff3Q62395 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff3Q62395 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff3Q62395 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff3Q62395 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff3Q62395 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tff3Q62395 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff3Q62395 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tff3Q62395 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff3Q62395 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tff3Q62395 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tff3Q62395 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.14□□□□□ -0.15
Tff3Q62395 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff3Q62395 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.14□□□□□ -0.15
Tff3Q62395 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.14□□□□□ -0.15
Tff3Q62395 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tff3Q62395 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.14□□□□□ -0.15
Tff3Q62395 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.14□□□□□ -0.15
Tff3Q62395 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.14□□□□□ -0.15
Tff3Q62395 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tff3Q62395 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Tff3Q62395 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Tff3Q62395 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.14□□□□□ -0.15
Tff3Q62395 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tff3Q62395 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.14□□□□□ -0.15
Tff3Q62395 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tff3Q62395 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tff3Q62395 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms