Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Six2Q62232 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Six2Q62232 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Six2Q62232 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Six2Q62232 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six2Q62232 Gm11355-201ENSMUST00000121120 306 ntBASIC17.47■□□□□ 0.39
Six2Q62232 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Six2Q62232 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Six2Q62232 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.47■□□□□ 0.39
Six2Q62232 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six2Q62232 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six2Q62232 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six2Q62232 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six2Q62232 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six2Q62232 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six2Q62232 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six2Q62232 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six2Q62232 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Six2Q62232 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Six2Q62232 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.47■□□□□ 0.39
Six2Q62232 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.46■□□□□ 0.39
Six2Q62232 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.46■□□□□ 0.39
Six2Q62232 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six2Q62232 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Six2Q62232 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six2Q62232 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.46■□□□□ 0.39
Six2Q62232 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Six2Q62232 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.46■□□□□ 0.39
Six2Q62232 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six2Q62232 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Six2Q62232 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six2Q62232 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Six2Q62232 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Six2Q62232 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six2Q62232 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six2Q62232 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six2Q62232 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six2Q62232 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six2Q62232 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Six2Q62232 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Six2Q62232 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Six2Q62232 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six2Q62232 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Six2Q62232 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six2Q62232 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six2Q62232 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six2Q62232 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six2Q62232 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.45■□□□□ 0.38
Six2Q62232 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.45■□□□□ 0.38
Six2Q62232 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six2Q62232 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six2Q62232 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six2Q62232 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Six2Q62232 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six2Q62232 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six2Q62232 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six2Q62232 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Six2Q62232 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six2Q62232 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six2Q62232 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Six2Q62232 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six2Q62232 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six2Q62232 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.44■□□□□ 0.38
Six2Q62232 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.44■□□□□ 0.38
Six2Q62232 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Six2Q62232 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six2Q62232 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Six2Q62232 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six2Q62232 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.44■□□□□ 0.38
Six2Q62232 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Six2Q62232 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.44■□□□□ 0.38
Six2Q62232 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six2Q62232 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six2Q62232 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six2Q62232 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six2Q62232 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Six2Q62232 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six2Q62232 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six2Q62232 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six2Q62232 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six2Q62232 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six2Q62232 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six2Q62232 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six2Q62232 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.44■□□□□ 0.38
Six2Q62232 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six2Q62232 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Six2Q62232 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six2Q62232 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six2Q62232 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six2Q62232 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six2Q62232 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Six2Q62232 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six2Q62232 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.43■□□□□ 0.38
Six2Q62232 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Six2Q62232 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.43■□□□□ 0.38
Six2Q62232 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.43■□□□□ 0.38
Six2Q62232 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Six2Q62232 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six2Q62232 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Six2Q62232 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms