Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.09■□□□□ 0.49
Ecm1Q61508 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.09■□□□□ 0.49
Ecm1Q61508 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.09■□□□□ 0.49
Ecm1Q61508 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.09■□□□□ 0.49
Ecm1Q61508 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.09■□□□□ 0.49
Ecm1Q61508 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ecm1Q61508 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ecm1Q61508 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ecm1Q61508 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ecm1Q61508 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ecm1Q61508 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ecm1Q61508 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Ecm1Q61508 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ecm1Q61508 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ecm1Q61508 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.08■□□□□ 0.48
Ecm1Q61508 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ecm1Q61508 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.08■□□□□ 0.48
Ecm1Q61508 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ecm1Q61508 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ecm1Q61508 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.08■□□□□ 0.48
Ecm1Q61508 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ecm1Q61508 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ecm1Q61508 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.08■□□□□ 0.48
Ecm1Q61508 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ecm1Q61508 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ecm1Q61508 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ecm1Q61508 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ecm1Q61508 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ecm1Q61508 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ecm1Q61508 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ecm1Q61508 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ecm1Q61508 Gm23935-201ENSMUST00000102303 57 ntBASIC18.07■□□□□ 0.48
Ecm1Q61508 Gm24270-201ENSMUST00000102326 57 ntBASIC18.07■□□□□ 0.48
Ecm1Q61508 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.07■□□□□ 0.48
Ecm1Q61508 Gm24245-201ENSMUST00000157318 57 ntBASIC18.07■□□□□ 0.48
Ecm1Q61508 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.07■□□□□ 0.48
Ecm1Q61508 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.07■□□□□ 0.48
Ecm1Q61508 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.07■□□□□ 0.48
Ecm1Q61508 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ecm1Q61508 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ecm1Q61508 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ecm1Q61508 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.07■□□□□ 0.48
Ecm1Q61508 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ecm1Q61508 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ecm1Q61508 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ecm1Q61508 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ecm1Q61508 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ecm1Q61508 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ecm1Q61508 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ecm1Q61508 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ecm1Q61508 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.06■□□□□ 0.48
Ecm1Q61508 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ecm1Q61508 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.06■□□□□ 0.48
Ecm1Q61508 Gm18622-201ENSMUST00000219361 595 ntBASIC18.06■□□□□ 0.48
Ecm1Q61508 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ecm1Q61508 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ecm1Q61508 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.06■□□□□ 0.48
Ecm1Q61508 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ecm1Q61508 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ecm1Q61508 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ecm1Q61508 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ecm1Q61508 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ecm1Q61508 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ecm1Q61508 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ecm1Q61508 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ecm1Q61508 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ecm1Q61508 Gm24513-201ENSMUST00000174964 138 ntBASIC18.05■□□□□ 0.48
Ecm1Q61508 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.05■□□□□ 0.48
Ecm1Q61508 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.05■□□□□ 0.48
Ecm1Q61508 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ecm1Q61508 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ecm1Q61508 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ecm1Q61508 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Ecm1Q61508 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ecm1Q61508 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ecm1Q61508 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ecm1Q61508 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ecm1Q61508 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ecm1Q61508 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.04■□□□□ 0.48
Ecm1Q61508 Gm27646-201ENSMUST00000183989 110 ntBASIC18.04■□□□□ 0.48
Ecm1Q61508 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ecm1Q61508 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ecm1Q61508 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ecm1Q61508 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ecm1Q61508 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ecm1Q61508 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ecm1Q61508 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ecm1Q61508 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ecm1Q61508 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms