Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.12■□□□□ 0.33
Vps41Q5KU39 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.12■□□□□ 0.33
Vps41Q5KU39 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Gm18958-201ENSMUST00000174258 762 ntBASIC17.12■□□□□ 0.33
Vps41Q5KU39 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps41Q5KU39 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps41Q5KU39 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.11■□□□□ 0.33
Vps41Q5KU39 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps41Q5KU39 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps41Q5KU39 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vps41Q5KU39 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps41Q5KU39 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps41Q5KU39 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps41Q5KU39 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps41Q5KU39 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.1■□□□□ 0.33
Vps41Q5KU39 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Vps41Q5KU39 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps41Q5KU39 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vps41Q5KU39 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps41Q5KU39 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vps41Q5KU39 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.1■□□□□ 0.33
Vps41Q5KU39 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps41Q5KU39 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps41Q5KU39 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps41Q5KU39 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps41Q5KU39 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Vps41Q5KU39 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps41Q5KU39 Gm38027-201ENSMUST00000192315 235 ntBASIC17.09■□□□□ 0.33
Vps41Q5KU39 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps41Q5KU39 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps41Q5KU39 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Vps41Q5KU39 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps41Q5KU39 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps41Q5KU39 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps41Q5KU39 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps41Q5KU39 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps41Q5KU39 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps41Q5KU39 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vps41Q5KU39 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.08■□□□□ 0.33
Vps41Q5KU39 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vps41Q5KU39 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps41Q5KU39 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.08■□□□□ 0.33
Vps41Q5KU39 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vps41Q5KU39 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vps41Q5KU39 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps41Q5KU39 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps41Q5KU39 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps41Q5KU39 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Vps41Q5KU39 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.08■□□□□ 0.32
Vps41Q5KU39 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps41Q5KU39 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.08■□□□□ 0.32
Vps41Q5KU39 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps41Q5KU39 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Vps41Q5KU39 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Vps41Q5KU39 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps41Q5KU39 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps41Q5KU39 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms