Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps13aQ5H8C4 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps13aQ5H8C4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vps13aQ5H8C4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps13aQ5H8C4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Vps13aQ5H8C4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.15■□□□□ 0.18
Vps13aQ5H8C4 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps13aQ5H8C4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps13aQ5H8C4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps13aQ5H8C4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps13aQ5H8C4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps13aQ5H8C4 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.15■□□□□ 0.18
Vps13aQ5H8C4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps13aQ5H8C4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps13aQ5H8C4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps13aQ5H8C4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps13aQ5H8C4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Vps13aQ5H8C4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.18
Vps13aQ5H8C4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Vps13aQ5H8C4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Gm25948-201ENSMUST00000175334 112 ntBASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Gm45747-201ENSMUST00000212203 999 ntBASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Gm7653-201ENSMUST00000214567 508 ntBASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps13aQ5H8C4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Gm25406-201ENSMUST00000157599 105 ntBASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Gm43474-201ENSMUST00000196415 774 ntBASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vps13aQ5H8C4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 Gm13823-201ENSMUST00000119930 345 ntBASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 Gm8655-201ENSMUST00000221159 852 ntBASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Vps13aQ5H8C4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Vps13aQ5H8C4 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.11■□□□□ 0.17
Vps13aQ5H8C4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps13aQ5H8C4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps13aQ5H8C4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps13aQ5H8C4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps13aQ5H8C4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps13aQ5H8C4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vps13aQ5H8C4 Mir1895-201ENSMUST00000122615 79 ntBASIC16.11■□□□□ 0.17
Vps13aQ5H8C4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vps13aQ5H8C4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms