Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Gm18032-201ENSMUST00000222541 538 ntBASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Gm9987-201ENSMUST00000069768 567 ntBASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.51■□□□□ 0.71
Rnf20Q5DTM8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf20Q5DTM8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf20Q5DTM8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.49■□□□□ 0.71
Rnf20Q5DTM8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Rnf20Q5DTM8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf20Q5DTM8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf20Q5DTM8 Gm11355-201ENSMUST00000121120 306 ntBASIC19.49■□□□□ 0.71
Rnf20Q5DTM8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf20Q5DTM8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf20Q5DTM8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf20Q5DTM8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf20Q5DTM8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf20Q5DTM8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.49■□□□□ 0.71
Rnf20Q5DTM8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf20Q5DTM8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf20Q5DTM8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rnf20Q5DTM8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf20Q5DTM8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf20Q5DTM8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.48■□□□□ 0.71
Rnf20Q5DTM8 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.48■□□□□ 0.71
Rnf20Q5DTM8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf20Q5DTM8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rnf20Q5DTM8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Rnf20Q5DTM8 Gm37722-201ENSMUST00000193757 208 ntBASIC19.48■□□□□ 0.71
Rnf20Q5DTM8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf20Q5DTM8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf20Q5DTM8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rnf20Q5DTM8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.48■□□□□ 0.71
Rnf20Q5DTM8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf20Q5DTM8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf20Q5DTM8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf20Q5DTM8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf20Q5DTM8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Gm10013-201ENSMUST00000106074 672 ntBASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf20Q5DTM8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms