Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1brtQ3UNC9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Gm10418-201ENSMUST00000100943 576 ntBASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1brtQ3UNC9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Gm9847-201ENSMUST00000052528 599 ntBASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1brtQ3UNC9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Gm43137-201ENSMUST00000198052 594 ntBASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms