Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Spg11Q3UHA3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Spg11Q3UHA3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Spg11Q3UHA3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.06■□□□□ 0
Spg11Q3UHA3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Spg11Q3UHA3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Spg11Q3UHA3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.06■□□□□ 0
Spg11Q3UHA3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.05■□□□□ 0
Spg11Q3UHA3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.05■□□□□ 0
Spg11Q3UHA3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.05■□□□□ 0
Spg11Q3UHA3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Spg11Q3UHA3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Spg11Q3UHA3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.05■□□□□ 0
Spg11Q3UHA3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.05■□□□□ 0
Spg11Q3UHA3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.05■□□□□ 0
Spg11Q3UHA3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Spg11Q3UHA3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Spg11Q3UHA3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Spg11Q3UHA3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.05■□□□□ 0
Spg11Q3UHA3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Spg11Q3UHA3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Spg11Q3UHA3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.05■□□□□ -0
Spg11Q3UHA3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Spg11Q3UHA3 Gm25287-201ENSMUST00000103846 110 ntBASIC15.05■□□□□ -0
Spg11Q3UHA3 Gm22918-201ENSMUST00000103855 110 ntBASIC15.05■□□□□ -0
Spg11Q3UHA3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Spg11Q3UHA3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Spg11Q3UHA3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.05■□□□□ -0
Spg11Q3UHA3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.05■□□□□ -0
Spg11Q3UHA3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.05■□□□□ -0
Spg11Q3UHA3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Spg11Q3UHA3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Spg11Q3UHA3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Spg11Q3UHA3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Spg11Q3UHA3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Spg11Q3UHA3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Spg11Q3UHA3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Spg11Q3UHA3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.04■□□□□ -0
Spg11Q3UHA3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.04■□□□□ -0
Spg11Q3UHA3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.04■□□□□ -0
Spg11Q3UHA3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Spg11Q3UHA3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.04■□□□□ -0
Spg11Q3UHA3 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.04■□□□□ -0
Spg11Q3UHA3 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.04■□□□□ -0
Spg11Q3UHA3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.04■□□□□ -0
Spg11Q3UHA3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Spg11Q3UHA3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Spg11Q3UHA3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Spg11Q3UHA3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Spg11Q3UHA3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Spg11Q3UHA3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.04■□□□□ -0
Spg11Q3UHA3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Spg11Q3UHA3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Spg11Q3UHA3 Gm17837-201ENSMUST00000186435 985 ntBASIC15.04■□□□□ -0
Spg11Q3UHA3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.04■□□□□ -0
Spg11Q3UHA3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.04■□□□□ -0
Spg11Q3UHA3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.04■□□□□ -0
Spg11Q3UHA3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Spg11Q3UHA3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Spg11Q3UHA3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.04■□□□□ -0
Spg11Q3UHA3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Spg11Q3UHA3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Spg11Q3UHA3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Spg11Q3UHA3 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.04■□□□□ -0
Spg11Q3UHA3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Spg11Q3UHA3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.03■□□□□ -0
Spg11Q3UHA3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Spg11Q3UHA3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Spg11Q3UHA3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.03■□□□□ -0
Spg11Q3UHA3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.03■□□□□ -0
Spg11Q3UHA3 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.03■□□□□ -0
Spg11Q3UHA3 Gm20553-201ENSMUST00000204205 844 ntBASIC15.03■□□□□ -0
Spg11Q3UHA3 Gm5779-201ENSMUST00000218467 910 ntBASIC15.03■□□□□ -0
Spg11Q3UHA3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.03■□□□□ -0
Spg11Q3UHA3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Spg11Q3UHA3 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.03■□□□□ -0
Spg11Q3UHA3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.03■□□□□ -0
Spg11Q3UHA3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.03■□□□□ -0
Spg11Q3UHA3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.03■□□□□ -0
Spg11Q3UHA3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.03■□□□□ -0
Spg11Q3UHA3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Spg11Q3UHA3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.03■□□□□ -0
Spg11Q3UHA3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.03■□□□□ -0
Spg11Q3UHA3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.03■□□□□ -0
Spg11Q3UHA3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Spg11Q3UHA3 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.03■□□□□ -0
Spg11Q3UHA3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Spg11Q3UHA3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Spg11Q3UHA3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Spg11Q3UHA3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Spg11Q3UHA3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.02■□□□□ -0
Spg11Q3UHA3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.02■□□□□ -0
Spg11Q3UHA3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.02■□□□□ -0
Spg11Q3UHA3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.02■□□□□ -0
Spg11Q3UHA3 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.02■□□□□ -0
Spg11Q3UHA3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Spg11Q3UHA3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.02■□□□□ -0
Spg11Q3UHA3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Spg11Q3UHA3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Spg11Q3UHA3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms