Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3U1D9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3U1D9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3U1D9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3U1D9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3U1D9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3U1D9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.2□□□□□ -0.14
Q3U1D9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Q3U1D9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.2□□□□□ -0.14
Q3U1D9 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.2□□□□□ -0.14
Q3U1D9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.2□□□□□ -0.14
Q3U1D9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3U1D9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3U1D9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3U1D9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3U1D9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Q3U1D9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3U1D9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3U1D9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Q3U1D9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3U1D9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3U1D9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Q3U1D9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3U1D9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q3U1D9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Q3U1D9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Q3U1D9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.19□□□□□ -0.14
Q3U1D9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.19□□□□□ -0.14
Q3U1D9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Q3U1D9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q3U1D9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Q3U1D9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Q3U1D9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
Q3U1D9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.18□□□□□ -0.14
Q3U1D9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.18□□□□□ -0.14
Q3U1D9 Gm5864-201ENSMUST00000202263 970 ntBASIC14.18□□□□□ -0.14
Q3U1D9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.18□□□□□ -0.14
Q3U1D9 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.18□□□□□ -0.14
Q3U1D9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q3U1D9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U1D9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U1D9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U1D9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U1D9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U1D9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U1D9 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.17□□□□□ -0.14
Q3U1D9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U1D9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Q3U1D9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U1D9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U1D9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Q3U1D9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Q3U1D9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U1D9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.17□□□□□ -0.14
Q3U1D9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.17□□□□□ -0.14
Q3U1D9 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.17□□□□□ -0.14
Q3U1D9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U1D9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U1D9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U1D9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Q3U1D9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U1D9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Q3U1D9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q3U1D9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms