Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc4Q08624 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc4Q08624 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc4Q08624 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.69■□□□□ 0.1
Hoxc4Q08624 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.69■□□□□ 0.1
Hoxc4Q08624 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc4Q08624 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc4Q08624 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc4Q08624 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.69■□□□□ 0.1
Hoxc4Q08624 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.69■□□□□ 0.1
Hoxc4Q08624 Gm44771-201ENSMUST00000206975 626 ntBASIC15.69■□□□□ 0.1
Hoxc4Q08624 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc4Q08624 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc4Q08624 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc4Q08624 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Hoxc4Q08624 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc4Q08624 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc4Q08624 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc4Q08624 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxc4Q08624 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Hoxc4Q08624 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc4Q08624 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc4Q08624 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.68■□□□□ 0.1
Hoxc4Q08624 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Hoxc4Q08624 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc4Q08624 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc4Q08624 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc4Q08624 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxc4Q08624 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc4Q08624 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc4Q08624 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.68■□□□□ 0.1
Hoxc4Q08624 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxc4Q08624 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Hoxc4Q08624 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc4Q08624 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc4Q08624 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.68■□□□□ 0.1
Hoxc4Q08624 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc4Q08624 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.68■□□□□ 0.1
Hoxc4Q08624 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxc4Q08624 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.67■□□□□ 0.1
Hoxc4Q08624 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.67■□□□□ 0.1
Hoxc4Q08624 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Gm8655-201ENSMUST00000221159 852 ntBASIC15.67■□□□□ 0.1
Hoxc4Q08624 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
Hoxc4Q08624 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Gm4459-201ENSMUST00000118750 468 ntBASIC15.66■□□□□ 0.1
Hoxc4Q08624 Gm18733-201ENSMUST00000173950 856 ntBASIC15.66■□□□□ 0.1
Hoxc4Q08624 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Gm4535-201ENSMUST00000182274 558 ntBASIC15.66■□□□□ 0.1
Hoxc4Q08624 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Gm10355-201ENSMUST00000097146 517 ntBASIC15.66■□□□□ 0.1
Hoxc4Q08624 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxc4Q08624 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxc4Q08624 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hoxc4Q08624 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxc4Q08624 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxc4Q08624 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxc4Q08624 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hoxc4Q08624 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms