Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ufd1P70362 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.1□□□□□ -0.15
Ufd1P70362 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ufd1P70362 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ufd1P70362 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.1□□□□□ -0.15
Ufd1P70362 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ufd1P70362 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Ufd1P70362 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.1□□□□□ -0.15
Ufd1P70362 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.1□□□□□ -0.15
Ufd1P70362 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.1□□□□□ -0.15
Ufd1P70362 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ufd1P70362 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ufd1P70362 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ufd1P70362 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ufd1P70362 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ufd1P70362 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ufd1P70362 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ufd1P70362 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ufd1P70362 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ufd1P70362 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ufd1P70362 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ufd1P70362 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Ufd1P70362 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ufd1P70362 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ufd1P70362 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ufd1P70362 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ufd1P70362 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ufd1P70362 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ufd1P70362 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ufd1P70362 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ufd1P70362 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ufd1P70362 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ufd1P70362 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.09□□□□□ -0.15
Ufd1P70362 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ufd1P70362 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ufd1P70362 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ufd1P70362 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ufd1P70362 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ufd1P70362 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ufd1P70362 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ufd1P70362 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.08□□□□□ -0.16
Ufd1P70362 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
Ufd1P70362 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.08□□□□□ -0.16
Ufd1P70362 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ufd1P70362 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ufd1P70362 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.08□□□□□ -0.16
Ufd1P70362 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ufd1P70362 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.08□□□□□ -0.16
Ufd1P70362 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.08□□□□□ -0.16
Ufd1P70362 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.08□□□□□ -0.16
Ufd1P70362 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.08□□□□□ -0.16
Ufd1P70362 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.08□□□□□ -0.16
Ufd1P70362 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ufd1P70362 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ufd1P70362 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.08□□□□□ -0.16
Ufd1P70362 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ufd1P70362 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ufd1P70362 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ufd1P70362 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Ufd1P70362 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.07□□□□□ -0.16
Ufd1P70362 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ufd1P70362 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms