Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Hmgb1P63158 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgb1P63158 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgb1P63158 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgb1P63158 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgb1P63158 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgb1P63158 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Hmgb1P63158 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgb1P63158 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgb1P63158 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgb1P63158 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgb1P63158 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgb1P63158 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18■□□□□ 0.47
Hmgb1P63158 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Hmgb1P63158 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hmgb1P63158 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18■□□□□ 0.47
Hmgb1P63158 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgb1P63158 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgb1P63158 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hmgb1P63158 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgb1P63158 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Hmgb1P63158 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgb1P63158 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgb1P63158 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgb1P63158 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hmgb1P63158 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgb1P63158 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgb1P63158 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgb1P63158 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgb1P63158 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgb1P63158 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgb1P63158 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgb1P63158 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.99■□□□□ 0.47
Hmgb1P63158 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgb1P63158 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgb1P63158 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgb1P63158 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.99■□□□□ 0.47
Hmgb1P63158 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgb1P63158 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.99■□□□□ 0.47
Hmgb1P63158 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.99■□□□□ 0.47
Hmgb1P63158 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.99■□□□□ 0.47
Hmgb1P63158 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.99■□□□□ 0.47
Hmgb1P63158 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgb1P63158 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Hmgb1P63158 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgb1P63158 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgb1P63158 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgb1P63158 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgb1P63158 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgb1P63158 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgb1P63158 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgb1P63158 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgb1P63158 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Hmgb1P63158 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgb1P63158 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgb1P63158 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgb1P63158 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.98■□□□□ 0.47
Hmgb1P63158 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgb1P63158 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.98■□□□□ 0.47
Hmgb1P63158 Gm37055-201ENSMUST00000191866 133 ntBASIC17.98■□□□□ 0.47
Hmgb1P63158 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgb1P63158 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Hmgb1P63158 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgb1P63158 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgb1P63158 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.98■□□□□ 0.47
Hmgb1P63158 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgb1P63158 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgb1P63158 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Hmgb1P63158 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgb1P63158 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgb1P63158 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgb1P63158 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgb1P63158 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgb1P63158 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hmgb1P63158 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hmgb1P63158 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Hmgb1P63158 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.97■□□□□ 0.47
Hmgb1P63158 Dancr-204ENSMUST00000132389 2347 ntBASIC17.97■□□□□ 0.47
Hmgb1P63158 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.97■□□□□ 0.47
Hmgb1P63158 Gm7213-201ENSMUST00000215977 950 ntBASIC17.97■□□□□ 0.47
Hmgb1P63158 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hmgb1P63158 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hmgb1P63158 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgb1P63158 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms