Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rhbdl3P58873 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rhbdl3P58873 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.34■□□□□ 0.69
Rhbdl3P58873 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rhbdl3P58873 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rhbdl3P58873 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rhbdl3P58873 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.34■□□□□ 0.69
Rhbdl3P58873 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.34■□□□□ 0.69
Rhbdl3P58873 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
Rhbdl3P58873 Gm5364-201ENSMUST00000216789 889 ntBASIC19.34■□□□□ 0.69
Rhbdl3P58873 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.34■□□□□ 0.69
Rhbdl3P58873 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rhbdl3P58873 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Rhbdl3P58873 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rhbdl3P58873 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rhbdl3P58873 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rhbdl3P58873 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rhbdl3P58873 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rhbdl3P58873 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rhbdl3P58873 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Rhbdl3P58873 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rhbdl3P58873 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rhbdl3P58873 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rhbdl3P58873 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Rhbdl3P58873 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rhbdl3P58873 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rhbdl3P58873 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Rhbdl3P58873 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rhbdl3P58873 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rhbdl3P58873 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.33■□□□□ 0.68
Rhbdl3P58873 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.33■□□□□ 0.68
Rhbdl3P58873 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rhbdl3P58873 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rhbdl3P58873 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rhbdl3P58873 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.33■□□□□ 0.68
Rhbdl3P58873 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Rhbdl3P58873 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Rhbdl3P58873 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rhbdl3P58873 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rhbdl3P58873 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rhbdl3P58873 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rhbdl3P58873 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rhbdl3P58873 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.32■□□□□ 0.68
Rhbdl3P58873 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.32■□□□□ 0.68
Rhbdl3P58873 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.32■□□□□ 0.68
Rhbdl3P58873 Gm6550-201ENSMUST00000187574 993 ntBASIC19.32■□□□□ 0.68
Rhbdl3P58873 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.32■□□□□ 0.68
Rhbdl3P58873 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.32■□□□□ 0.68
Rhbdl3P58873 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rhbdl3P58873 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rhbdl3P58873 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rhbdl3P58873 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rhbdl3P58873 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rhbdl3P58873 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rhbdl3P58873 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rhbdl3P58873 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rhbdl3P58873 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rhbdl3P58873 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rhbdl3P58873 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rhbdl3P58873 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
Rhbdl3P58873 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.31■□□□□ 0.68
Rhbdl3P58873 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.31■□□□□ 0.68
Rhbdl3P58873 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.31■□□□□ 0.68
Rhbdl3P58873 AV026068-213ENSMUST00000223675 1171 ntBASIC19.31■□□□□ 0.68
Rhbdl3P58873 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.31■□□□□ 0.68
Rhbdl3P58873 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rhbdl3P58873 Gm15590-201ENSMUST00000078419 552 ntBASIC19.31■□□□□ 0.68
Rhbdl3P58873 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rhbdl3P58873 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rhbdl3P58873 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rhbdl3P58873 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rhbdl3P58873 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.3■□□□□ 0.68
Rhbdl3P58873 Psmb5-202ENSMUST00000227257 622 ntBASIC19.3■□□□□ 0.68
Rhbdl3P58873 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Gm5867-201ENSMUST00000063197 592 ntBASIC19.3■□□□□ 0.68
Rhbdl3P58873 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Rhbdl3P58873 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rhbdl3P58873 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms