Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh6P54276 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.7■□□□□ 0.9
Msh6P54276 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.7■□□□□ 0.9
Msh6P54276 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.7■□□□□ 0.9
Msh6P54276 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Msh6P54276 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Msh6P54276 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh6P54276 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh6P54276 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.7■□□□□ 0.9
Msh6P54276 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh6P54276 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh6P54276 Gm15590-201ENSMUST00000078419 552 ntBASIC20.7■□□□□ 0.9
Msh6P54276 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Msh6P54276 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msh6P54276 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Msh6P54276 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh6P54276 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh6P54276 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Msh6P54276 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh6P54276 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Msh6P54276 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh6P54276 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh6P54276 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Msh6P54276 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh6P54276 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh6P54276 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.69■□□□□ 0.9
Msh6P54276 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.69■□□□□ 0.9
Msh6P54276 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.69■□□□□ 0.9
Msh6P54276 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC20.69■□□□□ 0.9
Msh6P54276 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Msh6P54276 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh6P54276 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.69■□□□□ 0.9
Msh6P54276 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh6P54276 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msh6P54276 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC20.69■□□□□ 0.9
Msh6P54276 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh6P54276 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Msh6P54276 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.68■□□□□ 0.9
Msh6P54276 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Msh6P54276 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh6P54276 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Msh6P54276 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Msh6P54276 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh6P54276 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20.68■□□□□ 0.9
Msh6P54276 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh6P54276 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Msh6P54276 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.68■□□□□ 0.9
Msh6P54276 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.68■□□□□ 0.9
Msh6P54276 Gm6550-201ENSMUST00000187574 993 ntBASIC20.68■□□□□ 0.9
Msh6P54276 Gm6089-201ENSMUST00000197666 938 ntBASIC20.68■□□□□ 0.9
Msh6P54276 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Msh6P54276 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Msh6P54276 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh6P54276 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh6P54276 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msh6P54276 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Msh6P54276 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Msh6P54276 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Msh6P54276 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh6P54276 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC20.67■□□□□ 0.9
Msh6P54276 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Msh6P54276 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh6P54276 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh6P54276 Gm12260-201ENSMUST00000122447 411 ntBASIC20.67■□□□□ 0.9
Msh6P54276 Gm11780-201ENSMUST00000136880 516 ntBASIC20.67■□□□□ 0.9
Msh6P54276 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Msh6P54276 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.67■□□□□ 0.9
Msh6P54276 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.67■□□□□ 0.9
Msh6P54276 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msh6P54276 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Msh6P54276 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msh6P54276 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.66■□□□□ 0.9
Msh6P54276 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msh6P54276 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msh6P54276 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.66■□□□□ 0.9
Msh6P54276 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Msh6P54276 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msh6P54276 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.66■□□□□ 0.9
Msh6P54276 Gm12497-201ENSMUST00000138778 237 ntBASIC20.66■□□□□ 0.9
Msh6P54276 Gm9727-201ENSMUST00000161387 555 ntBASIC20.66■□□□□ 0.9
Msh6P54276 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msh6P54276 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC20.66■□□□□ 0.9
Msh6P54276 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Msh6P54276 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msh6P54276 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msh6P54276 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Msh6P54276 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh6P54276 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh6P54276 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.65■□□□□ 0.9
Msh6P54276 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh6P54276 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh6P54276 Gm13036-201ENSMUST00000117799 748 ntBASIC20.65■□□□□ 0.9
Msh6P54276 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh6P54276 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh6P54276 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Msh6P54276 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Msh6P54276 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Msh6P54276 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh6P54276 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Msh6P54276 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms