Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cux1P53564 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cux1P53564 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cux1P53564 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cux1P53564 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cux1P53564 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Cux1P53564 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC25.07■■□□□ 1.6
Cux1P53564 Mir8117-201ENSMUST00000184773 107 ntBASIC25.07■■□□□ 1.6
Cux1P53564 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cux1P53564 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC25.06■■□□□ 1.6
Cux1P53564 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cux1P53564 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Cux1P53564 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cux1P53564 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cux1P53564 Gm4899-201ENSMUST00000178708 719 ntBASIC25.06■■□□□ 1.6
Cux1P53564 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC25.06■■□□□ 1.6
Cux1P53564 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Cux1P53564 AC093926.2-201ENSMUST00000214468 1228 ntBASIC25.06■■□□□ 1.6
Cux1P53564 AC174742.1-201ENSMUST00000218272 304 ntBASIC25.06■■□□□ 1.6
Cux1P53564 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cux1P53564 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cux1P53564 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cux1P53564 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Cux1P53564 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cux1P53564 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cux1P53564 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cux1P53564 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cux1P53564 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Cux1P53564 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cux1P53564 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC25.05■■□□□ 1.6
Cux1P53564 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cux1P53564 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC25.05■■□□□ 1.6
Cux1P53564 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Cux1P53564 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC25.05■■□□□ 1.6
Cux1P53564 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC25.05■■□□□ 1.6
Cux1P53564 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cux1P53564 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cux1P53564 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC25.04■■□□□ 1.6
Cux1P53564 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC25.04■■□□□ 1.6
Cux1P53564 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cux1P53564 Gm5253-201ENSMUST00000187104 1025 ntBASIC25.04■■□□□ 1.6
Cux1P53564 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Cux1P53564 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cux1P53564 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cux1P53564 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Cux1P53564 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cux1P53564 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cux1P53564 Gm36858-201ENSMUST00000194501 2391 ntBASIC25.04■■□□□ 1.6
Cux1P53564 Gm37811-201ENSMUST00000192416 2601 ntBASIC25.04■■□□□ 1.6
Cux1P53564 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
Cux1P53564 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Cux1P53564 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cux1P53564 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Cux1P53564 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC25.03■■□□□ 1.6
Cux1P53564 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cux1P53564 Gm15500-202ENSMUST00000071641 1019 ntBASIC25.03■■□□□ 1.6
Cux1P53564 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Cux1P53564 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cux1P53564 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cux1P53564 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cux1P53564 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cux1P53564 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cux1P53564 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC25.03■■□□□ 1.6
Cux1P53564 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC25.02■■□□□ 1.6
Cux1P53564 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC25.02■■□□□ 1.6
Cux1P53564 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC25.02■■□□□ 1.6
Cux1P53564 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cux1P53564 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Cux1P53564 AC131709.1-201ENSMUST00000224731 1180 ntBASIC25.02■■□□□ 1.6
Cux1P53564 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cux1P53564 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cux1P53564 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC25.02■■□□□ 1.6
Cux1P53564 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Cux1P53564 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cux1P53564 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cux1P53564 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Cux1P53564 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cux1P53564 Gm4609-201ENSMUST00000106443 1002 ntBASIC25.02■■□□□ 1.6
Cux1P53564 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC25.02■■□□□ 1.6
Cux1P53564 Gm5138-201ENSMUST00000113842 1002 ntBASIC25.02■■□□□ 1.6
Cux1P53564 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cux1P53564 Gm15191-201ENSMUST00000117933 1000 ntBASIC25.02■■□□□ 1.6
Cux1P53564 Gm12182-201ENSMUST00000118655 1008 ntBASIC25.02■■□□□ 1.6
Cux1P53564 Gm13882-201ENSMUST00000120886 1002 ntBASIC25.02■■□□□ 1.6
Cux1P53564 Gm10284-201ENSMUST00000145057 1005 ntBASIC25.02■■□□□ 1.6
Cux1P53564 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cux1P53564 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC25.02■■□□□ 1.6
Cux1P53564 Auts2-212ENSMUST00000178555 309 ntBASIC25.02■■□□□ 1.6
Cux1P53564 Gm10481-201ENSMUST00000179228 1002 ntBASIC25.02■■□□□ 1.6
Cux1P53564 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cux1P53564 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC25.02■■□□□ 1.6
Cux1P53564 Gm2574-201ENSMUST00000181051 1002 ntBASIC25.02■■□□□ 1.6
Cux1P53564 Gm3200-201ENSMUST00000181493 1002 ntBASIC25.02■■□□□ 1.6
Cux1P53564 Gm8825-201ENSMUST00000182565 998 ntBASIC25.02■■□□□ 1.6
Cux1P53564 Gm4518-201ENSMUST00000182638 718 ntBASIC25.02■■□□□ 1.6
Cux1P53564 Gm8330-201ENSMUST00000182754 1008 ntBASIC25.02■■□□□ 1.6
Cux1P53564 Gm4575-201ENSMUST00000182991 1002 ntBASIC25.02■■□□□ 1.6
Cux1P53564 Gm8709-201ENSMUST00000183230 1012 ntBASIC25.02■■□□□ 1.6
Cux1P53564 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cux1P53564 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms