Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hmga2P52927 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.96□□□□□ -0.17
Hmga2P52927 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Hmga2P52927 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmga2P52927 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Hmga2P52927 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmga2P52927 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Hmga2P52927 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmga2P52927 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmga2P52927 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Hmga2P52927 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hmga2P52927 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hmga2P52927 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.96□□□□□ -0.18
Hmga2P52927 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hmga2P52927 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Hmga2P52927 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Hmga2P52927 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hmga2P52927 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Hmga2P52927 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hmga2P52927 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hmga2P52927 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hmga2P52927 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hmga2P52927 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hmga2P52927 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hmga2P52927 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.95□□□□□ -0.18
Hmga2P52927 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Hmga2P52927 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Hmga2P52927 Actl10-202ENSMUST00000226583 1501 ntBASIC13.95□□□□□ -0.18
Hmga2P52927 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.95□□□□□ -0.18
Hmga2P52927 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Hmga2P52927 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Hmga2P52927 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Hmga2P52927 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.95□□□□□ -0.18
Hmga2P52927 Gm37179-201ENSMUST00000194862 823 ntBASIC13.95□□□□□ -0.18
Hmga2P52927 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Hmga2P52927 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Hmga2P52927 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Hmga2P52927 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hmga2P52927 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmga2P52927 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hmga2P52927 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Hmga2P52927 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hmga2P52927 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hmga2P52927 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmga2P52927 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmga2P52927 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmga2P52927 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmga2P52927 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Hmga2P52927 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmga2P52927 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmga2P52927 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmga2P52927 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Hmga2P52927 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmga2P52927 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmga2P52927 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hmga2P52927 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.94□□□□□ -0.18
Hmga2P52927 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmga2P52927 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmga2P52927 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmga2P52927 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hmga2P52927 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.93□□□□□ -0.18
Hmga2P52927 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Hmga2P52927 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmga2P52927 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmga2P52927 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hmga2P52927 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hmga2P52927 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hmga2P52927 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmga2P52927 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmga2P52927 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Hmga2P52927 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmga2P52927 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hmga2P52927 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.93□□□□□ -0.18
Hmga2P52927 Gm18958-201ENSMUST00000174258 762 ntBASIC13.93□□□□□ -0.18
Hmga2P52927 Gm38027-201ENSMUST00000192315 235 ntBASIC13.93□□□□□ -0.18
Hmga2P52927 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.93□□□□□ -0.18
Hmga2P52927 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.93□□□□□ -0.18
Hmga2P52927 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmga2P52927 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmga2P52927 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.93□□□□□ -0.18
Hmga2P52927 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hmga2P52927 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms