Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SftpbP50405 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SftpbP50405 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SftpbP50405 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.79■□□□□ 0.28
SftpbP50405 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SftpbP50405 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.79■□□□□ 0.28
SftpbP50405 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SftpbP50405 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SftpbP50405 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.78■□□□□ 0.28
SftpbP50405 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SftpbP50405 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SftpbP50405 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SftpbP50405 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.78■□□□□ 0.28
SftpbP50405 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SftpbP50405 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SftpbP50405 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SftpbP50405 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SftpbP50405 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SftpbP50405 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.78■□□□□ 0.28
SftpbP50405 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.78■□□□□ 0.28
SftpbP50405 Gm3375-201ENSMUST00000203929 796 ntBASIC16.78■□□□□ 0.28
SftpbP50405 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SftpbP50405 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.78■□□□□ 0.28
SftpbP50405 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.78■□□□□ 0.28
SftpbP50405 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SftpbP50405 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SftpbP50405 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SftpbP50405 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SftpbP50405 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SftpbP50405 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SftpbP50405 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SftpbP50405 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SftpbP50405 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SftpbP50405 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SftpbP50405 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SftpbP50405 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SftpbP50405 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SftpbP50405 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SftpbP50405 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SftpbP50405 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.77■□□□□ 0.28
SftpbP50405 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SftpbP50405 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SftpbP50405 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.77■□□□□ 0.28
SftpbP50405 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.77■□□□□ 0.28
SftpbP50405 Odf3b-204ENSMUST00000227834 930 ntBASIC16.77■□□□□ 0.28
SftpbP50405 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SftpbP50405 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SftpbP50405 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.77■□□□□ 0.28
SftpbP50405 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SftpbP50405 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SftpbP50405 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SftpbP50405 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SftpbP50405 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SftpbP50405 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SftpbP50405 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SftpbP50405 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SftpbP50405 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SftpbP50405 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SftpbP50405 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SftpbP50405 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SftpbP50405 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SftpbP50405 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SftpbP50405 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SftpbP50405 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SftpbP50405 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.76■□□□□ 0.27
SftpbP50405 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.76■□□□□ 0.27
SftpbP50405 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SftpbP50405 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SftpbP50405 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SftpbP50405 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SftpbP50405 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SftpbP50405 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SftpbP50405 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.76■□□□□ 0.27
SftpbP50405 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SftpbP50405 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SftpbP50405 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SftpbP50405 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.75■□□□□ 0.27
SftpbP50405 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SftpbP50405 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SftpbP50405 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SftpbP50405 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SftpbP50405 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.75■□□□□ 0.27
SftpbP50405 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SftpbP50405 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SftpbP50405 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SftpbP50405 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SftpbP50405 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SftpbP50405 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SftpbP50405 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SftpbP50405 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SftpbP50405 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SftpbP50405 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SftpbP50405 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SftpbP50405 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SftpbP50405 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SftpbP50405 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.74■□□□□ 0.27
SftpbP50405 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SftpbP50405 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SftpbP50405 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SftpbP50405 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms