Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.47■□□□□ 0.55
Atoh1P48985 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.47■□□□□ 0.55
Atoh1P48985 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atoh1P48985 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atoh1P48985 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Atoh1P48985 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Atoh1P48985 Gm18622-201ENSMUST00000219361 595 ntBASIC18.47■□□□□ 0.55
Atoh1P48985 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atoh1P48985 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atoh1P48985 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atoh1P48985 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Atoh1P48985 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atoh1P48985 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Atoh1P48985 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atoh1P48985 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atoh1P48985 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atoh1P48985 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.46■□□□□ 0.55
Atoh1P48985 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atoh1P48985 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.46■□□□□ 0.55
Atoh1P48985 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Atoh1P48985 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atoh1P48985 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Atoh1P48985 Gm11025-201ENSMUST00000140773 466 ntBASIC18.46■□□□□ 0.55
Atoh1P48985 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.46■□□□□ 0.55
Atoh1P48985 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.46■□□□□ 0.55
Atoh1P48985 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.46■□□□□ 0.55
Atoh1P48985 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.46■□□□□ 0.55
Atoh1P48985 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atoh1P48985 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Atoh1P48985 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atoh1P48985 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Atoh1P48985 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atoh1P48985 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atoh1P48985 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Atoh1P48985 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atoh1P48985 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atoh1P48985 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atoh1P48985 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atoh1P48985 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atoh1P48985 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.45■□□□□ 0.54
Atoh1P48985 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atoh1P48985 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atoh1P48985 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atoh1P48985 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atoh1P48985 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Atoh1P48985 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atoh1P48985 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atoh1P48985 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Atoh1P48985 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Atoh1P48985 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atoh1P48985 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atoh1P48985 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atoh1P48985 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Atoh1P48985 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atoh1P48985 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.44■□□□□ 0.54
Atoh1P48985 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atoh1P48985 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.44■□□□□ 0.54
Atoh1P48985 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Atoh1P48985 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Atoh1P48985 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.44■□□□□ 0.54
Atoh1P48985 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.44■□□□□ 0.54
Atoh1P48985 Gm17271-201ENSMUST00000165535 355 ntBASIC18.44■□□□□ 0.54
Atoh1P48985 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Atoh1P48985 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Atoh1P48985 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Atoh1P48985 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atoh1P48985 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atoh1P48985 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atoh1P48985 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.44■□□□□ 0.54
Atoh1P48985 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atoh1P48985 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atoh1P48985 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Atoh1P48985 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Atoh1P48985 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.43■□□□□ 0.54
Atoh1P48985 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Atoh1P48985 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Atoh1P48985 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Atoh1P48985 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.43■□□□□ 0.54
Atoh1P48985 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.43■□□□□ 0.54
Atoh1P48985 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Atoh1P48985 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Atoh1P48985 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atoh1P48985 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atoh1P48985 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atoh1P48985 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atoh1P48985 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Atoh1P48985 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atoh1P48985 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.42■□□□□ 0.54
Atoh1P48985 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atoh1P48985 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Atoh1P48985 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atoh1P48985 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Atoh1P48985 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atoh1P48985 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Atoh1P48985 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Atoh1P48985 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.41■□□□□ 0.54
Atoh1P48985 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Atoh1P48985 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Atoh1P48985 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Atoh1P48985 Mir6404-201ENSMUST00000183699 94 ntBASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms