Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Brca1P48754 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Brca1P48754 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.29■□□□□ 0.52
Brca1P48754 Gm8344-201ENSMUST00000119813 856 ntBASIC18.29■□□□□ 0.52
Brca1P48754 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Brca1P48754 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.29■□□□□ 0.52
Brca1P48754 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Brca1P48754 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.29■□□□□ 0.52
Brca1P48754 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.29■□□□□ 0.52
Brca1P48754 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Brca1P48754 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Brca1P48754 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Brca1P48754 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Brca1P48754 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Brca1P48754 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Brca1P48754 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Brca1P48754 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Brca1P48754 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Brca1P48754 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Brca1P48754 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Brca1P48754 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.29■□□□□ 0.52
Brca1P48754 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Brca1P48754 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Brca1P48754 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.29■□□□□ 0.52
Brca1P48754 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Brca1P48754 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Brca1P48754 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC18.28■□□□□ 0.52
Brca1P48754 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Brca1P48754 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Brca1P48754 Gm27300-201ENSMUST00000184085 97 ntBASIC18.28■□□□□ 0.52
Brca1P48754 Gm27335-201ENSMUST00000184758 97 ntBASIC18.28■□□□□ 0.52
Brca1P48754 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.28■□□□□ 0.52
Brca1P48754 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.28■□□□□ 0.52
Brca1P48754 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Brca1P48754 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Brca1P48754 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Brca1P48754 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Brca1P48754 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Brca1P48754 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.28■□□□□ 0.52
Brca1P48754 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.28■□□□□ 0.52
Brca1P48754 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Brca1P48754 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Brca1P48754 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Brca1P48754 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Brca1P48754 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Brca1P48754 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
Brca1P48754 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.27■□□□□ 0.52
Brca1P48754 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Brca1P48754 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Brca1P48754 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Brca1P48754 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC18.27■□□□□ 0.52
Brca1P48754 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Brca1P48754 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.27■□□□□ 0.52
Brca1P48754 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Brca1P48754 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Brca1P48754 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Brca1P48754 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.27■□□□□ 0.51
Brca1P48754 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.27■□□□□ 0.51
Brca1P48754 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.27■□□□□ 0.51
Brca1P48754 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Brca1P48754 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Brca1P48754 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Brca1P48754 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Brca1P48754 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Brca1P48754 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Brca1P48754 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.26■□□□□ 0.51
Brca1P48754 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Brca1P48754 Gm23547-201ENSMUST00000158210 271 ntBASIC18.26■□□□□ 0.51
Brca1P48754 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Brca1P48754 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Brca1P48754 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Brca1P48754 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Brca1P48754 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Brca1P48754 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
Brca1P48754 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Brca1P48754 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Brca1P48754 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Brca1P48754 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Brca1P48754 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Brca1P48754 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Brca1P48754 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Brca1P48754 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Brca1P48754 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Brca1P48754 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Brca1P48754 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.25■□□□□ 0.51
Brca1P48754 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Brca1P48754 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Brca1P48754 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Brca1P48754 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Brca1P48754 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Brca1P48754 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.25■□□□□ 0.51
Brca1P48754 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Brca1P48754 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Brca1P48754 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Brca1P48754 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
Brca1P48754 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Brca1P48754 Gm37153-201ENSMUST00000193637 231 ntBASIC18.25■□□□□ 0.51
Brca1P48754 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Brca1P48754 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.25■□□□□ 0.51
Brca1P48754 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms