Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gdf6P43028 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gdf6P43028 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.17■□□□□ 0.34
Gdf6P43028 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gdf6P43028 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.17■□□□□ 0.34
Gdf6P43028 Gm7506-201ENSMUST00000207758 815 ntBASIC17.17■□□□□ 0.34
Gdf6P43028 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.17■□□□□ 0.34
Gdf6P43028 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.17■□□□□ 0.34
Gdf6P43028 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gdf6P43028 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gdf6P43028 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gdf6P43028 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gdf6P43028 Rps4l-201ENSMUST00000071745 943 ntBASIC17.17■□□□□ 0.34
Gdf6P43028 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Gdf6P43028 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gdf6P43028 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gdf6P43028 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gdf6P43028 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gdf6P43028 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gdf6P43028 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Gdf6P43028 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Gdf6P43028 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gdf6P43028 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gdf6P43028 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Gdf6P43028 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Gdf6P43028 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gdf6P43028 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
Gdf6P43028 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.16■□□□□ 0.34
Gdf6P43028 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Gdf6P43028 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.16■□□□□ 0.34
Gdf6P43028 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gdf6P43028 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gdf6P43028 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gdf6P43028 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gdf6P43028 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gdf6P43028 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gdf6P43028 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gdf6P43028 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gdf6P43028 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gdf6P43028 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gdf6P43028 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.15■□□□□ 0.34
Gdf6P43028 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.15■□□□□ 0.34
Gdf6P43028 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.15■□□□□ 0.34
Gdf6P43028 Gm6376-201ENSMUST00000209407 580 ntBASIC17.15■□□□□ 0.34
Gdf6P43028 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.15■□□□□ 0.34
Gdf6P43028 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gdf6P43028 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gdf6P43028 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gdf6P43028 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gdf6P43028 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gdf6P43028 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gdf6P43028 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gdf6P43028 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gdf6P43028 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gdf6P43028 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gdf6P43028 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gdf6P43028 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gdf6P43028 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gdf6P43028 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gdf6P43028 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.14■□□□□ 0.33
Gdf6P43028 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gdf6P43028 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gdf6P43028 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.14■□□□□ 0.33
Gdf6P43028 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gdf6P43028 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gdf6P43028 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gdf6P43028 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gdf6P43028 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gdf6P43028 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Gdf6P43028 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gdf6P43028 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gdf6P43028 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gdf6P43028 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gdf6P43028 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gdf6P43028 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gdf6P43028 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gdf6P43028 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Gdf6P43028 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gdf6P43028 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gdf6P43028 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gdf6P43028 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gdf6P43028 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gdf6P43028 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gdf6P43028 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gdf6P43028 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Gdf6P43028 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Gdf6P43028 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gdf6P43028 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.13■□□□□ 0.33
Gdf6P43028 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gdf6P43028 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.13■□□□□ 0.33
Gdf6P43028 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gdf6P43028 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.13■□□□□ 0.33
Gdf6P43028 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gdf6P43028 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gdf6P43028 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Gdf6P43028 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gdf6P43028 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gdf6P43028 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.13■□□□□ 0.33
Gdf6P43028 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.12■□□□□ 0.33
Gdf6P43028 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms