Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HttP42859 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HttP42859 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HttP42859 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.42■□□□□ 0.38
HttP42859 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.42■□□□□ 0.38
HttP42859 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HttP42859 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HttP42859 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.42■□□□□ 0.38
HttP42859 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.42■□□□□ 0.38
HttP42859 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.42■□□□□ 0.38
HttP42859 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HttP42859 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HttP42859 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HttP42859 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
HttP42859 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HttP42859 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HttP42859 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HttP42859 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HttP42859 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HttP42859 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.41■□□□□ 0.38
HttP42859 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HttP42859 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.41■□□□□ 0.38
HttP42859 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HttP42859 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HttP42859 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.41■□□□□ 0.38
HttP42859 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HttP42859 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.41■□□□□ 0.38
HttP42859 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HttP42859 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HttP42859 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HttP42859 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HttP42859 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HttP42859 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HttP42859 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HttP42859 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HttP42859 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HttP42859 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.4■□□□□ 0.38
HttP42859 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.4■□□□□ 0.38
HttP42859 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HttP42859 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HttP42859 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HttP42859 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HttP42859 Gm22065-201ENSMUST00000103753 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm22066-201ENSMUST00000103761 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm24932-201ENSMUST00000103763 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm24115-201ENSMUST00000103799 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm22190-201ENSMUST00000103827 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm22191-201ENSMUST00000103831 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm24721-201ENSMUST00000103849 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm28018-201ENSMUST00000103869 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm26399-201ENSMUST00000103937 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm25349-201ENSMUST00000177728 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm23616-201ENSMUST00000177797 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm25871-201ENSMUST00000177816 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm24752-201ENSMUST00000178240 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm24496-201ENSMUST00000178287 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm25649-201ENSMUST00000178476 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm25548-201ENSMUST00000178681 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm23147-201ENSMUST00000178841 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm26095-201ENSMUST00000179270 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm22171-201ENSMUST00000179283 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm23936-201ENSMUST00000179354 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm22619-201ENSMUST00000179516 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm25255-201ENSMUST00000179579 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm24755-201ENSMUST00000179691 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm26506-201ENSMUST00000179692 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm25086-201ENSMUST00000179931 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm23243-201ENSMUST00000180047 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm24659-201ENSMUST00000180212 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm24169-201ENSMUST00000180244 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm23689-201ENSMUST00000180354 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm27359-201ENSMUST00000184153 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm27785-201ENSMUST00000184268 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm27466-201ENSMUST00000184396 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm27703-201ENSMUST00000184836 110 ntBASIC17.39■□□□□ 0.37
HttP42859 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HttP42859 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HttP42859 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HttP42859 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HttP42859 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.39■□□□□ 0.37
HttP42859 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HttP42859 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HttP42859 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HttP42859 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm25857-201ENSMUST00000082788 129 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.39■□□□□ 0.37
HttP42859 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HttP42859 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HttP42859 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HttP42859 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HttP42859 Gm6912-201ENSMUST00000117218 544 ntBASIC17.38■□□□□ 0.37
HttP42859 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.38■□□□□ 0.37
HttP42859 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HttP42859 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.38■□□□□ 0.37
HttP42859 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HttP42859 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HttP42859 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HttP42859 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HttP42859 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HttP42859 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms