Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.14■□□□□ 0.17
HmgclP38060 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
HmgclP38060 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HmgclP38060 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HmgclP38060 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HmgclP38060 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.14■□□□□ 0.17
HmgclP38060 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HmgclP38060 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HmgclP38060 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HmgclP38060 Gm6623-201ENSMUST00000173570 544 ntBASIC16.14■□□□□ 0.17
HmgclP38060 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HmgclP38060 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.14■□□□□ 0.17
HmgclP38060 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HmgclP38060 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HmgclP38060 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
HmgclP38060 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HmgclP38060 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HmgclP38060 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HmgclP38060 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HmgclP38060 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HmgclP38060 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HmgclP38060 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
HmgclP38060 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HmgclP38060 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HmgclP38060 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.13■□□□□ 0.17
HmgclP38060 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
HmgclP38060 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.13■□□□□ 0.17
HmgclP38060 Gm6345-202ENSMUST00000180900 204 ntBASIC16.13■□□□□ 0.17
HmgclP38060 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HmgclP38060 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HmgclP38060 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.13■□□□□ 0.17
HmgclP38060 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HmgclP38060 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HmgclP38060 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HmgclP38060 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HmgclP38060 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HmgclP38060 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HmgclP38060 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HmgclP38060 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.12■□□□□ 0.17
HmgclP38060 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HmgclP38060 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HmgclP38060 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.12■□□□□ 0.17
HmgclP38060 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
HmgclP38060 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HmgclP38060 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 AA414768-201ENSMUST00000121924 1257 ntBASIC16.12■□□□□ 0.17
HmgclP38060 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.12■□□□□ 0.17
HmgclP38060 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.12■□□□□ 0.17
HmgclP38060 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HmgclP38060 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HmgclP38060 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.12■□□□□ 0.17
HmgclP38060 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HmgclP38060 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HmgclP38060 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HmgclP38060 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HmgclP38060 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.11■□□□□ 0.17
HmgclP38060 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HmgclP38060 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HmgclP38060 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HmgclP38060 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
HmgclP38060 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HmgclP38060 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HmgclP38060 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HmgclP38060 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HmgclP38060 Gm44430-201ENSMUST00000203376 995 ntBASIC16.11■□□□□ 0.17
HmgclP38060 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HmgclP38060 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.11■□□□□ 0.17
HmgclP38060 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HmgclP38060 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HmgclP38060 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HmgclP38060 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HmgclP38060 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HmgclP38060 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HmgclP38060 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HmgclP38060 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HmgclP38060 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HmgclP38060 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.1■□□□□ 0.17
HmgclP38060 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms