Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RetP35546 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
RetP35546 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RetP35546 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
RetP35546 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RetP35546 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RetP35546 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RetP35546 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RetP35546 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RetP35546 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RetP35546 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RetP35546 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RetP35546 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RetP35546 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.31■□□□□ 0.04
RetP35546 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
RetP35546 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RetP35546 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
RetP35546 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RetP35546 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RetP35546 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.31■□□□□ 0.04
RetP35546 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.31■□□□□ 0.04
RetP35546 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.31■□□□□ 0.04
RetP35546 Gm6443-201ENSMUST00000203599 874 ntBASIC15.31■□□□□ 0.04
RetP35546 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RetP35546 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RetP35546 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RetP35546 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RetP35546 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RetP35546 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RetP35546 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RetP35546 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RetP35546 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RetP35546 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RetP35546 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RetP35546 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RetP35546 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RetP35546 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.3■□□□□ 0.04
RetP35546 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.3■□□□□ 0.04
RetP35546 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.3■□□□□ 0.04
RetP35546 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.3■□□□□ 0.04
RetP35546 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.3■□□□□ 0.04
RetP35546 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RetP35546 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RetP35546 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RetP35546 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RetP35546 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
RetP35546 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RetP35546 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.29■□□□□ 0.04
RetP35546 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
RetP35546 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
RetP35546 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
RetP35546 Gm45328-201ENSMUST00000210942 917 ntBASIC15.29■□□□□ 0.04
RetP35546 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RetP35546 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.29■□□□□ 0.04
RetP35546 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RetP35546 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RetP35546 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms