Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Slc6a1P31648 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Slc6a1P31648 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a1P31648 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Slc6a1P31648 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Slc6a1P31648 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Slc6a1P31648 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Gm38285-201ENSMUST00000192928 922 ntBASIC14.12□□□□□ -0.15
Slc6a1P31648 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Slc6a1P31648 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.12□□□□□ -0.15
Slc6a1P31648 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Slc6a1P31648 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.12□□□□□ -0.15
Slc6a1P31648 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc6a1P31648 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Slc6a1P31648 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.11□□□□□ -0.15
Slc6a1P31648 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a1P31648 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a1P31648 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Slc6a1P31648 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a1P31648 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a1P31648 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a1P31648 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a1P31648 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.11□□□□□ -0.15
Slc6a1P31648 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
Slc6a1P31648 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a1P31648 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.11□□□□□ -0.15
Slc6a1P31648 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Slc6a1P31648 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a1P31648 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a1P31648 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.11□□□□□ -0.15
Slc6a1P31648 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a1P31648 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a1P31648 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Slc6a1P31648 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a1P31648 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc6a1P31648 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.11□□□□□ -0.15
Slc6a1P31648 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.1□□□□□ -0.15
Slc6a1P31648 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.1□□□□□ -0.15
Slc6a1P31648 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Slc6a1P31648 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a1P31648 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Slc6a1P31648 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Slc6a1P31648 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a1P31648 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.1□□□□□ -0.15
Slc6a1P31648 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Slc6a1P31648 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a1P31648 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.1□□□□□ -0.15
Slc6a1P31648 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Slc6a1P31648 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.1□□□□□ -0.15
Slc6a1P31648 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.1□□□□□ -0.15
Slc6a1P31648 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.1□□□□□ -0.15
Slc6a1P31648 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.1□□□□□ -0.15
Slc6a1P31648 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a1P31648 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a1P31648 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a1P31648 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a1P31648 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a1P31648 Flg-201ENSMUST00000050758 1488 ntBASIC14.1□□□□□ -0.15
Slc6a1P31648 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a1P31648 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a1P31648 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Slc6a1P31648 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Slc6a1P31648 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a1P31648 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.1□□□□□ -0.15
Slc6a1P31648 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
Slc6a1P31648 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Slc6a1P31648 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Slc6a1P31648 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Slc6a1P31648 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Slc6a1P31648 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms