Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nfkb1P25799 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Nfkb1P25799 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nfkb1P25799 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nfkb1P25799 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Nfkb1P25799 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nfkb1P25799 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nfkb1P25799 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nfkb1P25799 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nfkb1P25799 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nfkb1P25799 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nfkb1P25799 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.8■□□□□ 0.28
Nfkb1P25799 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nfkb1P25799 Mzt1-203ENSMUST00000227948 952 ntBASIC16.8■□□□□ 0.28
Nfkb1P25799 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nfkb1P25799 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nfkb1P25799 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Nfkb1P25799 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nfkb1P25799 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nfkb1P25799 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nfkb1P25799 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nfkb1P25799 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nfkb1P25799 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nfkb1P25799 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nfkb1P25799 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nfkb1P25799 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.79■□□□□ 0.28
Nfkb1P25799 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nfkb1P25799 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nfkb1P25799 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.79■□□□□ 0.28
Nfkb1P25799 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.79■□□□□ 0.28
Nfkb1P25799 Gm12644-201ENSMUST00000119935 606 ntBASIC16.79■□□□□ 0.28
Nfkb1P25799 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nfkb1P25799 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.79■□□□□ 0.28
Nfkb1P25799 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.79■□□□□ 0.28
Nfkb1P25799 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Nfkb1P25799 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nfkb1P25799 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nfkb1P25799 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nfkb1P25799 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nfkb1P25799 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nfkb1P25799 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Nfkb1P25799 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nfkb1P25799 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nfkb1P25799 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Nfkb1P25799 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nfkb1P25799 Gm13884-201ENSMUST00000118103 829 ntBASIC16.78■□□□□ 0.28
Nfkb1P25799 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.78■□□□□ 0.28
Nfkb1P25799 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nfkb1P25799 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nfkb1P25799 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Nfkb1P25799 Mir8098-201ENSMUST00000184011 137 ntBASIC16.78■□□□□ 0.28
Nfkb1P25799 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nfkb1P25799 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Nfkb1P25799 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.78■□□□□ 0.28
Nfkb1P25799 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.78■□□□□ 0.28
Nfkb1P25799 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nfkb1P25799 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Nfkb1P25799 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nfkb1P25799 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Nfkb1P25799 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nfkb1P25799 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nfkb1P25799 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nfkb1P25799 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nfkb1P25799 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nfkb1P25799 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nfkb1P25799 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nfkb1P25799 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Nfkb1P25799 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nfkb1P25799 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nfkb1P25799 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nfkb1P25799 Gm27867-201ENSMUST00000184778 125 ntBASIC16.77■□□□□ 0.28
Nfkb1P25799 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.77■□□□□ 0.28
Nfkb1P25799 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nfkb1P25799 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nfkb1P25799 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nfkb1P25799 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nfkb1P25799 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nfkb1P25799 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nfkb1P25799 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nfkb1P25799 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nfkb1P25799 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nfkb1P25799 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nfkb1P25799 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nfkb1P25799 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nfkb1P25799 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nfkb1P25799 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Nfkb1P25799 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Nfkb1P25799 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nfkb1P25799 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nfkb1P25799 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.76■□□□□ 0.27
Nfkb1P25799 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nfkb1P25799 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.76■□□□□ 0.27
Nfkb1P25799 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.76■□□□□ 0.27
Nfkb1P25799 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms