Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pde6bP23440 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pde6bP23440 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Pde6bP23440 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pde6bP23440 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6bP23440 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6bP23440 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6bP23440 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6bP23440 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6bP23440 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6bP23440 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.81■□□□□ 0.44
Pde6bP23440 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.81■□□□□ 0.44
Pde6bP23440 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6bP23440 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.81■□□□□ 0.44
Pde6bP23440 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6bP23440 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.81■□□□□ 0.44
Pde6bP23440 Gm18733-201ENSMUST00000173950 856 ntBASIC17.81■□□□□ 0.44
Pde6bP23440 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.81■□□□□ 0.44
Pde6bP23440 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6bP23440 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.81■□□□□ 0.44
Pde6bP23440 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6bP23440 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6bP23440 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6bP23440 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6bP23440 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6bP23440 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6bP23440 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pde6bP23440 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.81■□□□□ 0.44
Pde6bP23440 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pde6bP23440 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.81■□□□□ 0.44
Pde6bP23440 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6bP23440 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6bP23440 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6bP23440 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6bP23440 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6bP23440 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6bP23440 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6bP23440 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6bP23440 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6bP23440 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6bP23440 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6bP23440 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6bP23440 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.8■□□□□ 0.44
Pde6bP23440 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pde6bP23440 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6bP23440 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6bP23440 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6bP23440 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6bP23440 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6bP23440 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6bP23440 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6bP23440 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pde6bP23440 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6bP23440 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6bP23440 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6bP23440 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pde6bP23440 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6bP23440 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6bP23440 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6bP23440 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6bP23440 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6bP23440 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6bP23440 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6bP23440 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Pde6bP23440 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6bP23440 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6bP23440 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6bP23440 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.79■□□□□ 0.44
Pde6bP23440 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6bP23440 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Pde6bP23440 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pde6bP23440 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pde6bP23440 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6bP23440 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
Pde6bP23440 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Pde6bP23440 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6bP23440 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.79■□□□□ 0.44
Pde6bP23440 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.79■□□□□ 0.44
Pde6bP23440 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6bP23440 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Pde6bP23440 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pde6bP23440 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.78■□□□□ 0.44
Pde6bP23440 Gm44430-201ENSMUST00000203376 995 ntBASIC17.78■□□□□ 0.44
Pde6bP23440 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms